Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00490 ATGGTTCGCCAAACTGATTTAGTTATCATTGGTGTTTCTGTTGGTTTGGCACTTGGAATTCTGATATCTTGCCTCATATTTTTCGGCATAAGATGGTACAAGAAACGTGCTGCTCATCTTAGATTATCTGCAAATGAGTCCAGTATAACAACTCTTCCAATACGAACAAATGGATTGGGAACAAGTACCGACTTCAGTGCATCACTCGATAGTTCCATAGCCACATCGAGGTCAGAAAATCTCAAGAAAAATTCCCATTTCACTTGGTGGAATCATCAAAACAAAGATCGGTTTACTTCGGCATCAGGCATTCTGAAGTATTCATACAGAGAAATTCAAAAGGCCACACAAAACTTCACGACAACCTTGGGACAAGGATCATTTGGGACAGTTTATAAAGCAACAATGCCTACTGGGGAGGTTGTAGCAGTGAAGGTGCTTGCACCTAATTCCAAACAAGGGGAGAAAGAATTCCAAACAGAGGTATTTCTGCTAGGAAGACTGCATCACCGGAATCTTGTGAATTTGGTTGGATATTGTGTAGATAAAGGGCAACGCATACTGGTTTATCAGTATATGAGTCATGGAAGTTTAGCAAATCTTTTATATGGTGAAGAAAAAGGATTGAGTTGGGATGAAAGGCTGCAAATTGTTCTTGATATTTCACATGGAATAGAATACCTTCATGAAGGAGCAATCCCACCTGTCATACATCGCGATTTAAAGTCTGCCAACATATTGCTAGATCATTCAAAGAGAGCTAAGGTTGCTGATTTTGGACTCTCAAAAGAAGAGATCTTTGATGGCCGGAATTCTGGTCTCAAAGGTACATATGGCTACATGGATCCTGAATACATTTCCACAAGCAAGTTAACAACGAAGAGTGACATATACAGTTTTGGTATCATAGTTTTTGAGCTCATCACTGCCATCCACCCTCATCAAAATTTGATGGAGCTGCAATGGATCATGATGGTATAG 981 0.3986 MVRQTDLVIIGVSVGLALGILISCLIFFGIRWYKKRAAHLRLSANESSITTLPIRTNGLGTSTDFSASLDSSIATSRSENLKKNSHFTWWNHQNKDRFTSASGILKYSYREIQKATQNFTTTLGQGSFGTVYKATMPTGEVVAVKVLAPNSKQGEKEFQTEVFLLGRLHHRNLVNLVGYCVDKGQRILVYQYMSHGSLANLLYGEEKGLSWDERLQIVLDISHGIEYLHEGAIPPVIHRDLKSANILLDHSKRAKVADFGLSKEEIFDGRNSGLKGTYGYMDPEYISTSKLTTKSDIYSFGIIVFELITAIHPHQNLMELQWIMMV* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00490 326 Gene3D Transferase(Phosphotransferase) domain 1 193 325 - -
Phac4g00490 326 Gene3D Phosphorylase Kinase; domain 1 78 192 - -
Phac4g00490 326 ProSiteProfiles Protein kinase domain profile. 117 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00490 326 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 91 192 - -
Phac4g00490 326 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Phac4g00490 326 SUPERFAMILY Protein kinase-like (PK-like) 98 323 IPR011009 -
Phac4g00490 326 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Phac4g00490 326 ProSitePatterns Protein kinases ATP-binding region signature. 123 145 IPR017441 GO:0005524
Phac4g00490 326 Pfam Protein tyrosine and serine/threonine kinase 119 321 IPR001245 GO:0004672|GO:0006468
Phac4g00490 326 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 314 - -
Phac4g00490 326 SMART serkin_6 117 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00490 Phac-Chr4 5765049 5769818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00490 103 326 Receptor kinase-like Gene Family AT3G19300 48.069 1.44e-70 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Phac4g00490 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00490 - - gmx:100819995 593.964