Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00489 ATGGTTCGCCAAACTGATTTAGTTATCATTGGTGTTTCTGTTGGTTTGGCACTTGGAATTCTGATATCTTGCCTCATATTTTTCGGCATAAGATGGTACAAGAAACGTGCTGCTCATCTTAGATTATCTGCAAATGAGTCCAGTATAACAACTCTTCCAATACGAACAAATGGATTGGGAACAAGTACCGACTTCAGTGCATCACTCGATAGTTCCATAGCCACATCGAGGTCAGAAAATCTCAAGAAAAATTCCCATTTCACTTGGTGGAATCATCAAAACAAAGATCGGTTTACTTCGGCATCAGGCATTCTGAAGTATTCATACAGAGAAATTCAAAAGGCCACACAAAACTTCACGACAACCTTGGGACAAGGATCATTTGGGACAGTTTATAAAGCAACAATGCCTACTGGGGAGGTTGTAGCAGTGAAGGTGCTTGCACCTAATTCCAAACAAGGGGAGAAAGAATTCCAAACAGAGGTATTTCTGCTAGGAAGACTGCATCACCGGAATCTTGTGAATTTGGTTGGATATTGTGTAGATAAAGGGCAACGCATACTGGTTTATCAGTATATGAGTCATGGAAGTTTAGCAAATCTTTTATATGAAAAAGGATTGAGTTGGGATGAAAGGCTGCAAATTGTTCTTGATATTTCACATGGAATAGAATACCTTCATGAAGGAGCAATCCCACCTGTCATACATCGCGATTTAAAGTCTGCCAACATATTGCTAGATCATTCAAAGAGAGCTAAGGTTGCTGATTTTGGACTCTCAAAAGAAGAGATCTTTGATGGCCGGAATTCTGGTCTCAAAGGTACATATGGCTACATGGATCCTGAATACATTTCCACAAGCAAGTTAACAACGAAGAGTGACATATACAGTTTTGGTATCATAGTTTTTGAGCTCATCACTGCCATCCACCCTCATCAAAATTTGATGGAGTATGTTAACCTTGCTGCAATGGATCATGATGGTATAGATGAGATTCTTGACAAGAAAATAGTGGGAAAATGCAATCTTGAAGAAGTGAGGCAGCTTGCAAAGATTGGACACAAATGCTTGCACAAATCACCTAAGAAACGCCCCTCCATAGGTGAGGTTTCTCAGCTCATATCAAGAATAAAGCAAAGGCGTCAGAGACGTCTGACAGAAGATAACTTGTCATTTGCAAGCAACAACTTTTCTCGAGCTGTGAGTCGATTAGAAGATCGACAGGTTGAACTTAGCAGGATGTCAACCATTAGCCTAACAGAAACTGTATGA 1272 0.4009 MVRQTDLVIIGVSVGLALGILISCLIFFGIRWYKKRAAHLRLSANESSITTLPIRTNGLGTSTDFSASLDSSIATSRSENLKKNSHFTWWNHQNKDRFTSASGILKYSYREIQKATQNFTTTLGQGSFGTVYKATMPTGEVVAVKVLAPNSKQGEKEFQTEVFLLGRLHHRNLVNLVGYCVDKGQRILVYQYMSHGSLANLLYEKGLSWDERLQIVLDISHGIEYLHEGAIPPVIHRDLKSANILLDHSKRAKVADFGLSKEEIFDGRNSGLKGTYGYMDPEYISTSKLTTKSDIYSFGIIVFELITAIHPHQNLMEYVNLAAMDHDGIDEILDKKIVGKCNLEEVRQLAKIGHKCLHKSPKKRPSIGEVSQLISRIKQRRQRRLTEDNLSFASNNFSRAVSRLEDRQVELSRMSTISLTETV* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00489 423 ProSiteProfiles Protein kinase domain profile. 117 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00489 423 SUPERFAMILY Protein kinase-like (PK-like) 87 372 IPR011009 -
Phac4g00489 423 CDD STKc_IRAK 123 377 - -
Phac4g00489 423 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 384 - -
Phac4g00489 423 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 91 192 - -
Phac4g00489 423 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Phac4g00489 423 ProSitePatterns Protein kinases ATP-binding region signature. 123 145 IPR017441 GO:0005524
Phac4g00489 423 SMART serkin_6 117 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00489 423 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 193 400 - -
Phac4g00489 423 Gene3D Transferase(Phosphotransferase) domain 1 193 400 - -
Phac4g00489 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Phac4g00489 423 Pfam Protein kinase domain 121 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00489 423 Gene3D Phosphorylase Kinase; domain 1 79 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00489 Phac-Chr4 5765049 5769818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00489 103 374 Receptor kinase-like Gene Family AT3G19300 42.049 7.81e-70 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Phac4g00489 Pkinase 5.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00489 - - gmx:100819995 777.704