Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00478 ATGAATACACTACATTTCAAGAGGTTAAGTCTAGTGCCTATACAAGGGAGTATCTCCAAAACATTGAGTGTTAAAGATGCCATGAGGTTAGTGGTATTCAAGAAAAATGAGAAGTCAAATAAGACAAGGGTTGATCTAAATGATGTTTACAAATATTACAAACAGTCGACAGTGGACACATTGGATTGTGGCAACTGGTCCTTGCAATGCTTCAAGCTCACCGGCAAAGTTGAAGTCTTAGAGAGAAACTTAAGGAACTTTGTGGGACAAGATCTGGATCCCTTGAACTTGAGAGAGCTTCAGAGTTTGGAGCATCAGCTTGACACAGCTATAAAGCGCATCCGAACTAGAAAGAGCCAAGTTATGAATGAATCCATCTCAGATCTGCAGAAAAAGGCAAAGCAATTGCAAGAGCAAAATGGCACACTTACAAAGAAGATTAAGGAGAAAGGGAAGGCAGTGGCTGAACTTCCACAATGTGTGCCAGAAACCTTAGGTCAAACATGCCCTCCAGAGCTACAACCACAACATAGACTTGTTCCTTCTTTAACACTCGGTGAGAATCTAGAAGCAGCAGCAGCACTGCAGGAAGTGGATGAAGGACGAGCAGTTGGTGGTACCACTACTCTGATCCCACCATGGATGCTGCATCATTTTACAAGATAA 666 0.4234 MNTLHFKRLSLVPIQGSISKTLSVKDAMRLVVFKKNEKSNKTRVDLNDVYKYYKQSTVDTLDCGNWSLQCFKLTGKVEVLERNLRNFVGQDLDPLNLRELQSLEHQLDTAIKRIRTRKSQVMNESISDLQKKAKQLQEQNGTLTKKIKEKGKAVAELPQCVPETLGQTCPPELQPQHRLVPSLTLGENLEAAAALQEVDEGRAVGGTTTLIPPWMLHHFTR* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00478 221 Pfam K-box region 65 147 IPR002487 GO:0003700|GO:0005634|GO:0006355
Phac4g00478 221 ProSiteProfiles K-box domain profile. 63 153 IPR002487 GO:0003700|GO:0005634|GO:0006355
Phac4g00478 221 Coils Coil 119 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00478 Phac-Chr4 5676319 5680509 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00478 48 216 MADS-box Gene Family AT5G60910 44.751 8.46e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00478 K09264 - gmx:100787971 256.529