Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00474 ATGCTCAAAACACTTGAAAGGTACCAAAAGTGCAGCTATGGTGCAGTGGAAGTCAGCAAACCTGCCAAAGAGCTTGAGAGCAGCTATCGTGAGTACTTGAAGCTGAAAGGAAGATTTGAATCTCTTCAGAGGACACAAAGAAACCTTCTAGGTGAAGACTTGGGCCCATTAAATACCAAAGAACTTGAGCAGCTTGAGAGGCAACTAGATTCATCTCTCAAGCAAGTGAGGTCGACAAAGACTCAATTCATGCTGGACCAGTTAGCTGATCTTCAAAATAAGGAGCAGATGTTGGTAGAAGCAAACAGAGCTTTAACCATGAAGCTGGATGAAATCAATTCAAGAAACCAGTATAGGCAAACATGGGAAGCTGGCGATCAAAGTATGCCTTATGGTACTCCGAATGCACACTCTCAAGGCTTCTTCCAGCCTTTGGAGTGCAATCCAACATTGCAGATAGGTTCCGACTACAGGTACAACCCTGAAGCCTCAGATCAGCTAACTGGGACAACTCAAGCACAACAAGTGAACGGTTTTATTCCTGGATGGATGCTTTGA 558 0.4427 MLKTLERYQKCSYGAVEVSKPAKELESSYREYLKLKGRFESLQRTQRNLLGEDLGPLNTKELEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEQMLVEANRALTMKLDEINSRNQYRQTWEAGDQSMPYGTPNAHSQGFFQPLECNPTLQIGSDYRYNPEASDQLTGTTQAQQVNGFIPGWML* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00474 185 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Phac4g00474 185 Pfam K-box region 23 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
Phac4g00474 185 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00474 Phac-Chr4 5633341 5639711 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00474 1 185 MADS-box Gene Family AT5G15800 68.000 9.07e-80 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00474 K09264 - gmx:100785322 346.665