Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00472 ATGCTCAAAACACTTGAAAGGTACCAAAAGTGCAGCTATGGTGCAGTGGAAGTCAGCAAACCTGCCAAAGAGCTTGAGCAGAGCAGCTATCGTGAGTACTTGAAGCTGAAAGGAAGATTTGAATCTCTTCAGAGGACACAAAGAAACCTTCTAGGTGAAGACTTGGGCCCATTAAATACCAAAGAACTTGAGCAGCTTGAGAGGCAACTAGATTCATCTCTCAAGCAAGTGAGGTCGACAAAGACTCAATTCATGCTGGACCAGTTAGCTGATCTTCAAAATAAGGAGCAGATGTTGGTAGAAGCAAACAGAGCTTTAACCATGAAGCTGGATGAAATCAATTCAAGAAACCAGTATAGGCAAACATGGGAAGCTGGCGATCAAAGTATGCCTTATGGTACTCCGAATGCACACTCTCAAGGCTTCTTCCAGCCTTTGGAGTGCAATCCAACATTGCAGATAGGTTCCGACTACAGGTACAACCCTGAAGCCTCAGATCAGCTAACTGGGACAACTCAAGCACAACAAGTGAACGGTTTTATTCCTGGATGGATGCTTTGA 561 0.4439 MLKTLERYQKCSYGAVEVSKPAKELEQSSYREYLKLKGRFESLQRTQRNLLGEDLGPLNTKELEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEQMLVEANRALTMKLDEINSRNQYRQTWEAGDQSMPYGTPNAHSQGFFQPLECNPTLQIGSDYRYNPEASDQLTGTTQAQQVNGFIPGWML* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00472 186 ProSiteProfiles K-box domain profile. 26 116 IPR002487 GO:0003700|GO:0005634|GO:0006355
Phac4g00472 186 Pfam K-box region 26 110 IPR002487 GO:0003700|GO:0005634|GO:0006355
Phac4g00472 186 Coils Coil 63 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00472 Phac-Chr4 5633341 5639711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00472 1 186 MADS-box Gene Family AT5G15800 67.662 4.69e-78 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00472 K09264 - gmx:100785322 342.043