Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00457 ATGGGTGAACCAGCATCACCAGAACCTCTCAAAGTTATCCAAGTTTGTTCAGTTGCACCACTTCATGAACCAACCCTTCTTCCCACCTCTCTTCCACTAACCTTCTTCGACCTCTTATGGCTTCAATTTCCACCTGTTCAACGTCTCTTCTTCTATCCCTTCCCACACCCAACCTCTTCATTCCATTCCTCTCTTCTTCCCTCTCTCAAACACTCTCTTTCCCTCACTCTCCAACACTTTCTCCCTTTCGCCGGCACCCTCACATGGCCCTCTCACTCTCCCAAACCCACCATCAACTATCTCACCGGTGACACTGTTTCCTTCACTGTTGCTGAGTCCCACCAAAACTTCAACCATCTTTCCTCCCATCTCTGTGAAGCATCACAACGAAACCACTTAGCACCCAACTTGGCCAATTCCCATGATAAGTCATCTCTGTTGGCAGTTCAAGTCACCATGTTCCCAAATGCTGGCTTTTGCATTGGAATCACCACACACCATGCAGCTTTTGACGGAAAATCTTCTACCATGTTCCTCAAATCATGGGCCTACATATGCTCTAACCTTCAAAACCCTACTACACCTTCCTTACCTCAGCATCTTACACCTGTCTTTGACAGATCACTGATAAGAGACCCTTCTGGAATCGCTGAACTGTACGCGGAGTCGTGGAAGAATAAGAATGGTTCGAATAAACGAAGTCTCAAGGTGTGGGACTCTCTTACGGAAACACCAAGCGACGGACTCAAAGGTTTGTTTGAATTGACCCCTTCACAGATTCTAAAGCTCAAGCAACATGGAAACTCTAAGATGAAAGGGAATGTTCATGTGTCAACCTTTTGTGTTACGTGTGCTTATGTGTTGGCGTGTTTGGTCAAAGTGAAACAAGTGAAGGAAGAAAATGTGTTTTTCATATTTAGTATTGACTGTAGATCGCGCTTGGACCCTCCAATTCCTGCCACATATTTTGGAAACTGCGTTGCAGGAGGGAGCTTTGTGGTCCTGACTAAGGAGTTGGTTGAAAAAGATGGGTTCATTTGTGCTTTGGAGGGGATAGTTGAGACTTTGAACAGGGTGAAGGAAGAGGGTGTGTTGAAGGGAGCAGAAACATGGGGTGCGGGTATGAATATACCCAGGGACACTATAATCTTTTCTACTTCTGGATCTCCATTGTTGGAGGTTTATAGTATTGATTTTGGGTGGGGAAGGCCAAAGAAGGTGGATATCATATCCACAGACAAAACTGGAGCATTTTCTCTCAGTGAAAGTAGGGATATCAGTGGAGGAATTGAGATTGGAGTGATGTTAAGAAAAGCTGAGATGGAAGATTTTAGTACCCTTTTTGTTCAAGGACTTGATTCCCTTTAA 1368 0.4474 MGEPASPEPLKVIQVCSVAPLHEPTLLPTSLPLTFFDLLWLQFPPVQRLFFYPFPHPTSSFHSSLLPSLKHSLSLTLQHFLPFAGTLTWPSHSPKPTINYLTGDTVSFTVAESHQNFNHLSSHLCEASQRNHLAPNLANSHDKSSLLAVQVTMFPNAGFCIGITTHHAAFDGKSSTMFLKSWAYICSNLQNPTTPSLPQHLTPVFDRSLIRDPSGIAELYAESWKNKNGSNKRSLKVWDSLTETPSDGLKGLFELTPSQILKLKQHGNSKMKGNVHVSTFCVTCAYVLACLVKVKQVKEENVFFIFSIDCRSRLDPPIPATYFGNCVAGGSFVVLTKELVEKDGFICALEGIVETLNRVKEEGVLKGAETWGAGMNIPRDTIIFSTSGSPLLEVYSIDFGWGRPKKVDIISTDKTGAFSLSESRDISGGIEIGVMLRKAEMEDFSTLFVQGLDSL* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00457 455 Gene3D - 10 237 IPR023213 -
Phac4g00457 455 Gene3D - 244 455 IPR023213 -
Phac4g00457 455 Pfam Transferase family 30 445 - -
Phac4g00457 455 SUPERFAMILY CoA-dependent acyltransferases 275 412 - -
Phac4g00457 455 PANTHER - 10 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00457 Phac-Chr4 5450417 5451784 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00457 69 450 Monolignol Biosynthesis Gene Families AT5G48930 24.938 2.34e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00457 - - pvu:PHAVU_004G040100g 687.567