Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00454 ATGGGTGAACCAGCATCACCAGAACCTCTCAAAGTTATCCAAGTTTGTTCAGTTGCACCACTTCATGAACCAACCCTTCTTCCCACCTCTCTTCCACTAACCTTCTTCGACCTCTTATGGCTTCAATTTCCACCTGTTCAACGTCTCTTCTTCTATCCCTTCCCACACCCAACCTCTTCATTCCATTCCTCTCTTCTTCCCTCTCTCAAACACTCTCTTTCCCTCACTCTCCAACACTTTCTCCCTTTCGCCGGCACCCTCACATGGCCCTCTCACTCTCCCAAACCCACCATCAACTATCTCACCGGTGACACTGTTTCCTTCACTGTTGCTGAGTCCCACCAAAACTTCAACCATCTTTCCTCCCATCTCTGTGAAGCATCACAACGAAACCACTTAGCACCCAACTTGGCCAATTCCCATGATAAATCATCTCTGTTGGCAGTTCAAGTCACTGTGTTCCCAAATGCTGGCTTTTGCATTGGAATCACCACACACCATGCAGCTTTCGACGGAAAATCTTCTACCATGTTCATCAAATCATGGGCCTACATATGCTCTAACCTTCAAAACCCTACTACACCATCCTTACCTCAGCATCTTACACCTTTCTTTGACAGATCATCGATAAGAGACCCTTCTGGAATCGCTGAACTGTACGCGGAGTCGTGGAAGAATAAGAATGGTTCGAATAACCGAAGTCTCAAGGTGTGGGAGTCTCTTATGGAAACGCCAAGCGACGGACTCAAAGGTTTGTTTGAATTGACCCCTTCACAGATTCTAAAGCTCAAGCAACATGGAAACTCTAAGATGAAAGGGAATGTTCATCCGTCAACCTTTTGTGTTACGTGTGCTTATGTGTTGGCGTGTTTGGTCAAAGTGAAACAAGTGAAGGAAGAAAATGTGTTTTTCATATTTAGTATTGACTGTAGATCGCGCTTGGACCCTCCAATTCCTGCCACATATTTTGGAAACTGCGTTGCAGGAGGGAGCTTTGTGGTCGTGACTAAGGAGTTGGTTGAAAAAGATGGGTTCATTTGTGCTTTGGAGGGGATAGTTGAGACTTTGAACAGGGTGAAGGAAGAGGGAGTGTTGAAGGGAGCAGAAAGATGGGGTGCGGGTATGAATAAACCCAGGGAGACTAGATTCTTTTCTACTGCTGGATCTCCATTGTTTGAGGTTTATAGTATTGATTTTGGGTGGGGAAGGCCAAAGAAGGTGGATATGATATCCACAGACAAAACTGGAGCATTTTCTCTCAGTGAAAGTAGGGATATCAGTGGAGGAATTGAGATTGGAGTGATGTTAAGAAAAGCTGAGATGGAAGATTTTAGTACCCTTTTTGTTCAAGGACTTGATTCCCTTTAA 1368 0.4481 MGEPASPEPLKVIQVCSVAPLHEPTLLPTSLPLTFFDLLWLQFPPVQRLFFYPFPHPTSSFHSSLLPSLKHSLSLTLQHFLPFAGTLTWPSHSPKPTINYLTGDTVSFTVAESHQNFNHLSSHLCEASQRNHLAPNLANSHDKSSLLAVQVTVFPNAGFCIGITTHHAAFDGKSSTMFIKSWAYICSNLQNPTTPSLPQHLTPFFDRSSIRDPSGIAELYAESWKNKNGSNNRSLKVWESLMETPSDGLKGLFELTPSQILKLKQHGNSKMKGNVHPSTFCVTCAYVLACLVKVKQVKEENVFFIFSIDCRSRLDPPIPATYFGNCVAGGSFVVVTKELVEKDGFICALEGIVETLNRVKEEGVLKGAERWGAGMNKPRETRFFSTAGSPLFEVYSIDFGWGRPKKVDMISTDKTGAFSLSESRDISGGIEIGVMLRKAEMEDFSTLFVQGLDSL* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00454 455 Gene3D - 10 236 IPR023213 -
Phac4g00454 455 Gene3D - 244 455 IPR023213 -
Phac4g00454 455 SUPERFAMILY CoA-dependent acyltransferases 141 208 - -
Phac4g00454 455 Pfam Transferase family 30 445 - -
Phac4g00454 455 SUPERFAMILY CoA-dependent acyltransferases 279 412 - -
Phac4g00454 455 PANTHER - 10 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00454 Phac-Chr4 5421956 5423574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00454 69 450 Monolignol Biosynthesis Gene Families AT5G48930 25.189 6.58e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00454 - - pvu:PHAVU_004G040100g 680.633