Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00446 ATGGCTCCTTTTCCCTGTCTACCATTTTTCACCACCACAAAATCCAAAACCACAAGCAACTGTATCTCAATAGAACAATTCTGTCACCGCTTCTCTCTTGCAGAGCTTCAAGCAGCCACAAATGGGTTCAAGCCCAGTTTAATCGTCAGTGAAGAAGGTCAATGTCAGGTCTACAAAGCCCACCTCAAAGGCCATGGAGACGTAGCCATCAAGCACTTCAAGACTAGAAGCCCAGCTTACGATATAGAATTCAGGGTCGAAGTCAAGATTTTGTGCCAACTACACCACCCAAATATTGTTCATTTGGTCGGTTTCTGTGAGCACAAAAATGACAAGTTTGTTGTGTATGATTATGTCTCCAATGGAAGCCTCTACGATTGCTTGCATGGCACCAACAATAATGGTGTTGTTCCCTTGTCATGGATACAAAGACTTAACATCTGCATCGGGGTGGCTCGTGGACTGCACTACATTTACTTTGAAACCAAGATACCTATCATGCACCGTGCTGTGAAATCAAGCAATGTTCTTTTGGACCATAATTTGGTGCCAAAAGTGGCAGATTTTGGACTTTGCAAGAAGCATCCCCAAGAGGAGTCAAGGCCAAAGCCACCAAGAGTTGAGTTGAGGGAGAACTTGGAGGTTAGTTTGGAATACTTAGAGCCGGAGTATTTTATGACTGCAAGATTATCACACAAATCTGATGTGTACTCTTTTGGGGTGGTAATGTTAGAGATTTTGTGTAGGAAGGAAGCATGTTTTTTAACCCCAAGTGGAGATTGTGAGTACCTTGTTAAGTGGGCCTTTGATGATGAAAGGAAGGGGGTTTTTGAGAAGATTGTTGATCCATCTCTTATTGGAAAAATAGCACCTGCTTGTTGGGAAGTATTCATTGAGATTGTTCAGAGATGTTTGGCTTCAGTTGAAGAGAGGCCAACAATAGGTGAAGTGGCGATGGTTCTTGAAAATGCATTTCTGTTGCAGAGAGAGCAGATGTGTGAAGGAGTGTGA 1011 0.4293 MAPFPCLPFFTTTKSKTTSNCISIEQFCHRFSLAELQAATNGFKPSLIVSEEGQCQVYKAHLKGHGDVAIKHFKTRSPAYDIEFRVEVKILCQLHHPNIVHLVGFCEHKNDKFVVYDYVSNGSLYDCLHGTNNNGVVPLSWIQRLNICIGVARGLHYIYFETKIPIMHRAVKSSNVLLDHNLVPKVADFGLCKKHPQEESRPKPPRVELRENLEVSLEYLEPEYFMTARLSHKSDVYSFGVVMLEILCRKEACFLTPSGDCEYLVKWAFDDERKGVFEKIVDPSLIGKIAPACWEVFIEIVQRCLASVEERPTIGEVAMVLENAFLLQREQMCEGV* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00446 336 PANTHER OS07G0166700 PROTEIN 27 328 IPR045272 GO:0004714|GO:0006468
Phac4g00446 336 Gene3D Phosphorylase Kinase; domain 1 8 118 - -
Phac4g00446 336 SUPERFAMILY Protein kinase-like (PK-like) 15 319 IPR011009 -
Phac4g00446 336 Gene3D Transferase(Phosphotransferase) domain 1 119 333 - -
Phac4g00446 336 ProSiteProfiles Protein kinase domain profile. 43 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00446 336 Pfam Protein tyrosine and serine/threonine kinase 56 318 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00446 Phac-Chr4 5320621 5321887 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00446 28 335 Receptor kinase-like Gene Family AT5G59700 41.100 1.92e-71 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phac4g00446 PK_Tyr_Ser-Thr 6.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00446 - - var:108344519 607.831