Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00421 ATGTGTTCTGCTTCTTCTGTTACTTCTTCTTCATCTTTTTCTTCATCTTCATCTTCTTCTTCTTCTTCGTCTTCTTCTCCTTCTCATTGCGGTTCAGTGATCAAAAGGAATACCCTCATGCAATTTCAATTCTTTGTCTTCGTGGTCCTCCTCACGTTGCAAAACGACGCCGTTGCGATCGATTCGGACAAATCCGCGCTCCTCCGTATAAAGGCGTCGTTGTCCGACCCCGCCGGCGTTCTCTCCACGTGGACCACCACTGACAGTTCTGACTCCGGCCACTGCTACTGGTCTGGCGTCCTCTGCGACGCGAACTCCCGCGTCGTCGCCGTCAACGTCACCGGAAACGGCGGGAACCGAGCCTCGCACCCGTGCTCCGATTCCTCTAAATTCCCCCTCTACGGTTTCGGAATTCGGCGAACATGCAAAGGTAGCAAAGGTTCTCTCTTTGGAAACTTTTCGTCTTTTAATTTCAATTTCATCAGTGAGCTGACGGAGCTTAGGGTTTTGTCTCTCCCCTTCAACGCGTTGGAGGGGGAAATTCCCGAAGCAATTTGGGGCATGGAAAAGCTAGAGGTTCTCGATTTAGAAGGGAACTTGATAAGTGGCTATCTTCCCCTGAGAATTAATGGCTTGAGGAAGTTGAGGGTTCTGAATCTTGGGTTTAATAAGTTTATTGGGGAGGTACCTAGTTCAATTGCGTCTCTTGAGAGTTTGGAGGTTTTGAATTTGGCTGGTAATGAATTGAATGGTTCTGTGCCTGGTTTTGTTGGGAGGTTTAGAGGGGTGTATCTTTCGTTTAATCAGTTCAGTGGGAATGTTCCGCCAGAGATTGGGGAGAATTGTTGGAAGCTTGAGCATTTGGATTTATCTGGGAATTCGTTGGTTCAAGGGATTCCGGTGAGTTTGGGGAATTGTGGGAGGTTGAGGACGCTTTTGCTGTATTCCAATTTGTTGGAAGAAGGGATTCCTGGGAGTTTGGGGAATTGTGGGAGGTTGAGGACGCTTTTACTGTATTCCAATTTACTAGAAGAGGGTATTCCTGGTGAGCTTGGGAAGCTTAAGAGCCTTGAGGTGTTGGATGTGTCCAGGAACACTCTCAGTGGTTCTGTGCCAGCAGAGCTTGGGAATTGCTCGGATTTGTCAGTCCTGGTGCTGTCAAATCTCTTTGATCCACGTGGGGATGTTGCCGGAGATTTTGGGAAATTGGGTTCTTTGAATGATGAGCTGAACTATTTTGAAGGGTCGATGCCTGTGGAGGTTTTGTCGCTTCCGAAGCTGAGGATATTGTGGGCTCCCATGGTGAATTTGGAAGGCAGTTTTCAGGTAAGTTGGGGTCGTTGTCAGAGCTTGGAGATGGTCAATTTGGCTCAGAATTTTTTCAGTGGGGAATTTCCGAACCAGCTTGGTGTCTGCGAGAGACTGCATTTTCTTGATTTAAGCGGAAACAACCTTACTGGGGTTCTTTCTGAAGAACTTCGTGTTCCCTGTATGAGCACGTTTGATGTTAGCGGGAACATGTTATCTGGTTCAATTCCTGATTTCTCTAATACTGTTTGTCCCCCTGAACCTTCTTGGAATGGAGACCTGTTTAAAGATGGCAATGTTTCTCCACCATATGCATCCTTTTTTTCGTCAAAGGTTCAGGAGAATTCACTTTTCACAGCAATGGGGGGAGTTGGTATTTCAGTTGTTCACAACTTTGGTCAAAACAACTTCAATGGCATTCTGTCTTTACCTATGGCACGGGACAGGCTGGGGAAACAGAGCAGTTACACATTTCTGCTTGCAGGATCAATTCCTGTTGATTTAGGGAATATGGTCTCCCTTGCATCGCTGAACCTCAGTAGGAATCAGTTAGAAGGTCAGATTCCCACCAGCCTTGGCCAGATAAAGAATCTGAAGTTTCTTTCTTTGGCTGGTAATAAGTTAAATGGCTCAATTCCGACCAGCCTGGGGCAGTTGTACTCTTTGGAGATCTTGGACCTTTCTTCAAACTATCTTACTGGTGAGATTCCGAAGGCTATTGAGAACATGAGAAACCTGACTGATGTTTTGCTCAATAACAACAATCTTTCTGGTCACATTCCTGATGGTTTGGCATATGTCACTACACTCTCAGCATTCAATGTGTCTTTCAATAACTTATCTGGATCGTTGCCTTCAAATAGTGGCTTGATTAAATGCAGCAGTGCTGTTGGTAATCCGTATCTAAGCCCCTGCCGAGGAGTTTCTCTATCTGTGCCATCAGGAAGTCAACTAGGGCCTATTGATGGCAACCCTTATAATTCAGAATCAGAACAAGCTACTGGCAAGGAGAATGGGAATGGCTTAAGCTCTATTGAAATAGCATCTATAACTTCTGCCTCAGCCATATTTTCAGTTCTTATAGCCCTGATTGTTCTATTCTTTTACACTCGGAAGTGGAAACCTAGGTCCAGGGTTGTGGGTTCTACAAGAAAAGAAGTTACAGTGTTTACTGATATTGGGGTCCCATTGACGTTTGAAACTGTTGTCCAAGCCACAGGAAATTTCAATGCTGGCAACTGTATTGGCAGTGGAGGTTTTGGGGCAACATACAAGGCAGAGGTATCACCAGGAATCCTGGTGGCAGTCAAACGACTTGCAGTTGGACGTTTCCAAGGTGTTCAACAATTCCATGCTGAAACCAAGACCCTTGGGAGGCTTCATCATCCAAATCTTGTCACTCTGATTGGTTATCATGCTTGTGAGACAGAGATGTTTCTCATATACAATTATTTGCCTGGTGGGAATCTTGAAAAGTTCATCCAGGAGAGGTCCACAAGGGTTGTGGATTGGAGGATTCTTCACAAGATTGCATTGGACATAGCCCGTGCACTGGCCTATCTGCATGATCAGTGTGTTCCCCGTGTTCTTCACCGTGATGTCAAGCCCAGCAACATCTTGTTGGATGATGATTTCAATGCTTATCTATCGGACTTTGGATTGGCTAGACTTCTGGGAACTTCAGAGACACATGCAACCACTGGTGTAGCCGGAACATTTGGGTATGTTGCTCCAGAATATGCGATGACTTGCCGTGTTTCTGATAAGGCTGATGTGTATAGCTATGGTGTGGTGCTTCTGGAGTTGCTCTCAGACAAGAAGGCATTGGACCCTTCATTTTCTTCTTTTGGAAATGGGTTCAACATAGTGGCATGGGCATGCATGCTACTGAAGCAAGGAAGGGCAAATGAGTTCTTCACTGCTGGGTTATGGGAAGCAGGACCTGGAGATGATTTGGTAGAGGTGCTTCACTTGGCAATTGTGTGTACTGTTGACTCTCTCTCTACCAGACCTACAATGAAACAAGTTGTGAGAAGGCTTAAGCAACTTCAACCTCCATCATGCTAG 3375 0.4572 MCSASSVTSSSSFSSSSSSSSSSSSSPSHCGSVIKRNTLMQFQFFVFVVLLTLQNDAVAIDSDKSALLRIKASLSDPAGVLSTWTTTDSSDSGHCYWSGVLCDANSRVVAVNVTGNGGNRASHPCSDSSKFPLYGFGIRRTCKGSKGSLFGNFSSFNFNFISELTELRVLSLPFNALEGEIPEAIWGMEKLEVLDLEGNLISGYLPLRINGLRKLRVLNLGFNKFIGEVPSSIASLESLEVLNLAGNELNGSVPGFVGRFRGVYLSFNQFSGNVPPEIGENCWKLEHLDLSGNSLVQGIPVSLGNCGRLRTLLLYSNLLEEGIPGSLGNCGRLRTLLLYSNLLEEGIPGELGKLKSLEVLDVSRNTLSGSVPAELGNCSDLSVLVLSNLFDPRGDVAGDFGKLGSLNDELNYFEGSMPVEVLSLPKLRILWAPMVNLEGSFQVSWGRCQSLEMVNLAQNFFSGEFPNQLGVCERLHFLDLSGNNLTGVLSEELRVPCMSTFDVSGNMLSGSIPDFSNTVCPPEPSWNGDLFKDGNVSPPYASFFSSKVQENSLFTAMGGVGISVVHNFGQNNFNGILSLPMARDRLGKQSSYTFLLAGSIPVDLGNMVSLASLNLSRNQLEGQIPTSLGQIKNLKFLSLAGNKLNGSIPTSLGQLYSLEILDLSSNYLTGEIPKAIENMRNLTDVLLNNNNLSGHIPDGLAYVTTLSAFNVSFNNLSGSLPSNSGLIKCSSAVGNPYLSPCRGVSLSVPSGSQLGPIDGNPYNSESEQATGKENGNGLSSIEIASITSASAIFSVLIALIVLFFYTRKWKPRSRVVGSTRKEVTVFTDIGVPLTFETVVQATGNFNAGNCIGSGGFGATYKAEVSPGILVAVKRLAVGRFQGVQQFHAETKTLGRLHHPNLVTLIGYHACETEMFLIYNYLPGGNLEKFIQERSTRVVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSFGNGFNIVAWACMLLKQGRANEFFTAGLWEAGPGDDLVEVLHLAIVCTVDSLSTRPTMKQVVRRLKQLQPPSC* 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00421 1124 Pfam Protein kinase domain 848 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00421 1124 Gene3D Ribonuclease Inhibitor 550 738 IPR032675 -
Phac4g00421 1124 Gene3D Ribonuclease Inhibitor 262 390 IPR032675 -
Phac4g00421 1124 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 404 579 - -
Phac4g00421 1124 PRINTS Leucine-rich repeat signature 475 488 - -
Phac4g00421 1124 PRINTS Leucine-rich repeat signature 655 668 - -
Phac4g00421 1124 Pfam Leucine Rich Repeat 284 306 IPR001611 GO:0005515
Phac4g00421 1124 Pfam Leucine Rich Repeat 657 679 IPR001611 GO:0005515
Phac4g00421 1124 SUPERFAMILY Protein kinase-like (PK-like) 827 1116 IPR011009 -
Phac4g00421 1124 Gene3D Transferase(Phosphotransferase) domain 1 921 1121 - -
Phac4g00421 1124 ProSiteProfiles Protein kinase domain profile. 845 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00421 1124 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 333 1118 - -
Phac4g00421 1124 Gene3D Ribonuclease Inhibitor 58 261 IPR032675 -
Phac4g00421 1124 Pfam Leucine rich repeat N-terminal domain 61 103 IPR013210 -
Phac4g00421 1124 SMART LRR_typ_2 607 631 IPR003591 -
Phac4g00421 1124 SMART LRR_typ_2 164 188 IPR003591 -
Phac4g00421 1124 SMART LRR_typ_2 284 306 IPR003591 -
Phac4g00421 1124 SMART LRR_typ_2 212 235 IPR003591 -
Phac4g00421 1124 SMART LRR_typ_2 236 258 IPR003591 -
Phac4g00421 1124 SMART LRR_typ_2 679 703 IPR003591 -
Phac4g00421 1124 SMART LRR_typ_2 354 378 IPR003591 -
Phac4g00421 1124 SMART LRR_typ_2 655 678 IPR003591 -
Phac4g00421 1124 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 921 1123 - -
Phac4g00421 1124 SUPERFAMILY RNI-like 402 722 - -
Phac4g00421 1124 SMART serkin_6 845 1123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00421 1124 Gene3D Ribonuclease Inhibitor 395 524 IPR032675 -
Phac4g00421 1124 MobiDBLite consensus disorder prediction 1 27 - -
Phac4g00421 1124 Gene3D Phosphorylase Kinase; domain 1 808 920 - -
Phac4g00421 1124 ProSitePatterns Protein kinases ATP-binding region signature. 851 873 IPR017441 GO:0005524
Phac4g00421 1124 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 589 672 - -
Phac4g00421 1124 MobiDBLite consensus disorder prediction 755 774 - -
Phac4g00421 1124 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 303 390 - -
Phac4g00421 1124 SUPERFAMILY L domain-like 60 388 - -
Phac4g00421 1124 ProSitePatterns Serine/Threonine protein kinases active-site signature. 965 977 IPR008271 GO:0004672|GO:0006468
Phac4g00421 1124 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 809 920 - -
Phac4g00421 1124 CDD STKc_IRAK 851 1119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00421 Phac-Chr4 5064206 5079217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00421 57 1124 Receptor kinase-like Gene Family AT3G02130 59.739 0.0 1228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Phac4g00421 Pkinase 6.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00421 - - vum:124828178 1697.18