Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00332 ATGGCTGCAATGTCATGTTCCATTGCATTCTCCTATGATGTGTTCCTCAGCTTTAGAGGCTCAGACACACGCCATGGTTTTGTTGGCAACCTTTACAAAGCTCTTCAGGACAAGGGAATCCACACTTTCATTGATGATGAGAAGCTTGAGGGAGGAGAGGAAATAACACCTACCCTTATGAAGGCAATTGAAGAGTCTAGAATTGCGATCACTGTGCTCTCTCACAACTATGCTTCTTCATCATTTTGTTTAGATGAACTTGTTAATATCATTGGTTGTGCTGAGAAGAAAGGCTTGTTGGTTTTGCCTGTTTTTTACAACTTAGATCCTTCTGATGTGAGACACCAGAAAGGTAGTTATGCAGAAGCATTGACAAAGCATGAGGAAAGGTTCAAAGTTAAGAAGGAAAGTTTCAACCATAACAAGGAGAGGTTGGAGAAATGGAAGATGGCTCTGCATCACGTGGCTAACTTGTCTGGCTATCATTTCAAACCAGGATATGAATATGAATATGAGTTTATTGGGAAGATTGTTGAGTTGGTCTCTAGCAAGATTAATCGGAGTCCTATACATGTTGCAGATTACCCAATTGGACTAGAGACACAAATGCTAGAAGTAATGAAACTTTTGGATGTTGGAAGTGATGATAATGGTGTTCACATGATTGGGATTCATGGAATTGGTGGGATCGGAAAAACAACACTTGCTCTAGCCATTTATAATTTGGTAGCTGACCATTTTGATGGTTTGTGTTTTCTTGAAAACGTGAGAGAAAACTCGGACAAACATGGGTTACAACATCTCCAAAGCATCCTTCTTGCTGAGTTGGCTAAAGAAAAGAGAATAAACATAACAAGTGTGCAACAAGGAATTTCAATGTTACAACATAGGCTCCAACAAAAGAAGGTTCTCTTGATAGTAGATGATGCTAACAAGCATGAGCAATTGCAGGCTATTGTTGGAAGATCTGACTGGTTTGGTTCCGGGAGTAGAATCATCATAACAACTCGAGATGAGCAGCTGCTAGCATCTCATAAGGTTAAAAGAACATATGAGGTGAAGGAACTGAACAAGAATGAGGCTCTTCAATTGCTTACATGGAAAGCTTTTAGAACTGATGAAGTTGATCCAAGTTATGAGGAGGTCTTGAATAGTGTGGTAGCTTATGCTTCTGGCCTTCCATTGGCTTTGGAAGTAATAGGCTCCAACTTGTTTGGAAAAAGCATAGAAGAATGGAAATCTGCTATCAAACAATATAAAAGAATTCCTAATAATCAAATTCTAAAAGTACTTAAAGTAAGCTTCGATGCTTTGGAGGAAGAAGAGAAAAGTGTTTTTCTTGACATTGCTTGTTGCTTCAAAGGATGTGAATTGGAAGAGGTTCAAGATATACTTCATGGTCATTATGGTGATTGCATGAAATATCATATTGGGGTGTTGGTTGATAAATCTCTCTTAAAGCTTAGTCTGAATGGTATGGAGGTGACAATGCATGACTTGGTAGAGGACATGGGTAAAGAAATTGTAAGAAAGGAGTCACCAAAAGATCCAGGGAAGCGTAGCAGATTATGGTTGCATGAGGATATAATTCAAGTTTTAGAAGACAACACTGGAACTAGTGAAATTGAAATCATGCATCTGGATTTTCCCTTACTTGACAAAGAAGGAATGATAGAATGGAACAGAAAGGCCTTCAAGAAGATGAGAAACCTCAAAACACTAATTATTAAAAGTGGTAATTTTTCCAAAGGTCCCAAATATCTTCCAAATAGTCTCAGAGTATTAGAATGGTGGAGGTATCCTTCACATGGTTTACCATTTGATTTTCTTTCAAAGAAACTTGCCATGTGCAAGTTACCTGAGAGTTGCTTTACATCACTTGAGTTGGTCGACTTATTGAAGAAGTTCATGAGTATGAGATTTTTAAATCTGGACAAAAGCAAATATTTAAAACAGATACCTGATGTATCTGGTCTCCCAAATTTAGAGAAACTCTCATTTCAGCATTGTCAAAATCTAACTACAATTCACAATTCCATTGGATTTTTGCATAAATTGAAAATTTTGAGTGCTTTTGGTTGCACCAAACTTGTAAGTTTTCCACCTATCAAGTTGACTGCCCTTGAAAAGCTCAATCTCTCACGTTGTTATAGTCTTGAAAGTTTTCCAGAAATATTAGGAAAGATGGAAAACATCAGGGCACTTCAGTTGGAGCACACTGCCATAAAAGAATTGCCATTTTCTATTCAAAATCTTACACAACTTCAAGAGTTACAATTGTCTAACTGTGGAGTTGTTAAGTTACCAAGTAGCATTGTTATGATGTCAAAATTGATTGATCTTATTGGTTGGAAATGGAAAGGGTGGCAATGGCTAAAACAGGAAAATGATGAAGAAAAGGAAGGATCATCTATAGTATTTTCAAATGTAGAATGCCTTTGGGTCTCAGAATGCAACCTGTGTGATGATTTCTTTTCAATTGGTTTCAAACGATTTGCTCTTGTGAAAGACTTAGACCTATCAAAGAATAATTTCACAATCCTACCTGAATGCATCAAAGAGTTTCAATTTTTAAGGAAGCTTAATGTGAATGATTGCAAGCTTCTTCAGGAAATTAGAGGGATTCCACCAAGCTTGAAACATTTCTTAGCAACAAATTGTAAATCCTTGACTTCTTCAAGTATAAGCATGTTCCTAAATCAGGAACTACATGAGGCTGGAAAAACTCAATTTTATTTACCAGGAGAAAGGGTTCCGGAATGGTTTGATCACCAGTGCAATGGACCTTCAATTTCTTTTTGGTTTCAAAATAGGTTCCCTAAGAAGGTTCTTAGTCTTATAATTGGACCTATTGCAGATGACTGTGGAATGTTTTTGCCTATGGTAATCATCAATGGCAACAAATGTTTTCGTGGTAGTGGCTATTACATGATAGGAAGGGATCATACATATATTATTGATCTCCAAATGATAGGATTTGAAGAAAATTTATATGAAATTCCTTTGGAAAATGAATGGAACCATGCAGAAGTTAAATTTGTAGATTTGGAAGAGACATCAATTCTTAAAGAAAGTGGAATTTGTGTTTTCAAACAAGAAAGTAGCATGGAGGATATTTGGTTTTCTGATCCTTATGGCAAGAGAAAATTAGAAGATAATCTCAATAGTTTGAAATCACAAAGCCAACAATTGCTAAAAAAACATAGGTTTGTGGACATGGAAGCTTTGTAA 3231 0.3658 MAAMSCSIAFSYDVFLSFRGSDTRHGFVGNLYKALQDKGIHTFIDDEKLEGGEEITPTLMKAIEESRIAITVLSHNYASSSFCLDELVNIIGCAEKKGLLVLPVFYNLDPSDVRHQKGSYAEALTKHEERFKVKKESFNHNKERLEKWKMALHHVANLSGYHFKPGYEYEYEFIGKIVELVSSKINRSPIHVADYPIGLETQMLEVMKLLDVGSDDNGVHMIGIHGIGGIGKTTLALAIYNLVADHFDGLCFLENVRENSDKHGLQHLQSILLAELAKEKRINITSVQQGISMLQHRLQQKKVLLIVDDANKHEQLQAIVGRSDWFGSGSRIIITTRDEQLLASHKVKRTYEVKELNKNEALQLLTWKAFRTDEVDPSYEEVLNSVVAYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPNNQILKVLKVSFDALEEEEKSVFLDIACCFKGCELEEVQDILHGHYGDCMKYHIGVLVDKSLLKLSLNGMEVTMHDLVEDMGKEIVRKESPKDPGKRSRLWLHEDIIQVLEDNTGTSEIEIMHLDFPLLDKEGMIEWNRKAFKKMRNLKTLIIKSGNFSKGPKYLPNSLRVLEWWRYPSHGLPFDFLSKKLAMCKLPESCFTSLELVDLLKKFMSMRFLNLDKSKYLKQIPDVSGLPNLEKLSFQHCQNLTTIHNSIGFLHKLKILSAFGCTKLVSFPPIKLTALEKLNLSRCYSLESFPEILGKMENIRALQLEHTAIKELPFSIQNLTQLQELQLSNCGVVKLPSSIVMMSKLIDLIGWKWKGWQWLKQENDEEKEGSSIVFSNVECLWVSECNLCDDFFSIGFKRFALVKDLDLSKNNFTILPECIKEFQFLRKLNVNDCKLLQEIRGIPPSLKHFLATNCKSLTSSSISMFLNQELHEAGKTQFYLPGERVPEWFDHQCNGPSISFWFQNRFPKKVLSLIIGPIADDCGMFLPMVIINGNKCFRGSGYYMIGRDHTYIIDLQMIGFEENLYEIPLENEWNHAEVKFVDLEETSILKESGICVFKQESSMEDIWFSDPYGKRKLEDNLNSLKSQSQQLLKKHRFVDMEAL* 1077
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00332 1076 Gene3D - 10 183 IPR035897 -
Phac4g00332 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 449 IPR027417 -
Phac4g00332 1076 PRINTS Disease resistance protein signature 390 404 - -
Phac4g00332 1076 PRINTS Disease resistance protein signature 297 311 - -
Phac4g00332 1076 PRINTS Disease resistance protein signature 221 236 - -
Phac4g00332 1076 PRINTS Disease resistance protein signature 703 719 - -
Phac4g00332 1076 Coils Coil 1047 1067 - -
Phac4g00332 1076 Gene3D Ribonuclease Inhibitor 543 784 IPR032675 -
Phac4g00332 1076 Pfam NB-ARC domain 201 421 IPR002182 GO:0043531
Phac4g00332 1076 Gene3D - 355 439 IPR042197 -
Phac4g00332 1076 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 187 - -
Phac4g00332 1076 Gene3D Ribonuclease Inhibitor 789 906 IPR032675 -
Phac4g00332 1076 SUPERFAMILY "Winged helix" DNA-binding domain 426 534 IPR036390 -
Phac4g00332 1076 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 808 IPR044974 GO:0006952
Phac4g00332 1076 SMART till_3 11 158 IPR000157 GO:0007165
Phac4g00332 1076 Pfam TIR domain 12 186 IPR000157 GO:0007165
Phac4g00332 1076 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 161 IPR035897 -
Phac4g00332 1076 Gene3D - 184 351 IPR027417 -
Phac4g00332 1076 ProSiteProfiles TIR domain profile. 10 185 IPR000157 GO:0007165
Phac4g00332 1076 SUPERFAMILY L domain-like 550 896 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac4g00332 Phac-Chr4 4210065 4214306 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00332 12 778 WRKY Transcription Factor Family AT4G12020 31.665 8.79e-82 291
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00332 - - gmx:100780257 1773.44