Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00327 ATGGAGATAATAACACCAACGCCGCCACCAACAGCCGTCACTGCTTCAAACGCAGCCGCCAAATCGCCGGAACTCGACATCGAGACTCCGACCCGGATCCACCAAGCCGCCGGAAACTCGAATCCGAGTCCAAAGCCGGTGTCTTTCTCCAACGGGGTCTTGAAGCGCCACCATGCAAACCACCGCGCCGCCGCCGTGGTGGTTTACAAGGAATGCTTGAAGAACCACGTGGCGAGCTTAGGCGGCCACGCCCTCGACGGCTGCGGCGAGTTCATGCCGTCGCCGGCGGCAACCCCCGACGACCCCAGCTCCATCAAATGCGCCGCCTGCGGCTGCCACCGTAACTTCCACCGCCGCGAGCCAGAGGAGCCGCCAATTTCTCCGGCGACGCATCATGTCCTGGAGTACCAGCCCCACCACCGCCACCACCCTCCTCCGCCTCCGCCGCACCGGAGTCCGAACTCCTCCTCTCCGCCGCCGATCTCCTCCTACCCCTCCGCACCCCACATGCTCCTCGCCCTCTCCAGCGGCGGCGGCCTCTCCGTGGCGCCGGAAAACACCGCCGCTCCGGCCCCGGCGCACCACTCCCGGAAGCGCTTCCGCACGAAATTCAGCCAGGAGCAGAAGGAGAAGATGCACGAGTTCGCCGACAAAGTGGGGTGGAAGATGCAGAAGCGCGACGAGAACATGGTTATGGAGTTTTGCAACGAGATTGGTGTGGACAGGGGAGTCCTCAAAGTGTGGATGCATAACAACAAGAACACTTTGGCCAAAAAAGACAACCTTAATGGTAACGCTGCTATTGTCTCTGCTAACGGGATCAACCATGTCGCCAATGTAAACAAAGCTACCGTCAGAAGCAACGTTAATGGCCTCGAACATGAGCACGGTGCTGGAATCAACGGTAACACCAACAACGACCACGACCACAACCACATCCACAACCTCAGTTCTTCTCATGATGTGAACGAGTACGAGAATGACAGTGGAACAAACGGTGGTGGAACAAATGGCTCTTCTTCTTCTTAA 1029 0.5889 MEIITPTPPPTAVTASNAAAKSPELDIETPTRIHQAAGNSNPSPKPVSFSNGVLKRHHANHRAAAVVVYKECLKNHVASLGGHALDGCGEFMPSPAATPDDPSSIKCAACGCHRNFHRREPEEPPISPATHHVLEYQPHHRHHPPPPPPHRSPNSSSPPPISSYPSAPHMLLALSSGGGLSVAPENTAAPAPAHHSRKRFRTKFSQEQKEKMHEFADKVGWKMQKRDENMVMEFCNEIGVDRGVLKVWMHNNKNTLAKKDNLNGNAAIVSANGINHVANVNKATVRSNVNGLEHEHGAGINGNTNNDHDHNHIHNLSSSHDVNEYENDSGTNGGGTNGSSSS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00327 342 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 69 120 IPR006456 -
Phac4g00327 342 MobiDBLite consensus disorder prediction 307 321 - -
Phac4g00327 342 FunFam Zinc-finger homeodomain protein 2 185 258 - -
Phac4g00327 342 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 45 256 - -
Phac4g00327 342 MobiDBLite consensus disorder prediction 322 342 - -
Phac4g00327 342 Gene3D - 183 259 - -
Phac4g00327 342 SUPERFAMILY Homeodomain-like 187 258 IPR009057 -
Phac4g00327 342 MobiDBLite consensus disorder prediction 293 342 - -
Phac4g00327 342 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 69 120 IPR006456 -
Phac4g00327 342 MobiDBLite consensus disorder prediction 137 198 - -
Phac4g00327 342 MobiDBLite consensus disorder prediction 1 23 - -
Phac4g00327 342 Pfam ZF-HD protein dimerisation region 67 121 IPR006456 -
Phac4g00327 342 MobiDBLite consensus disorder prediction 148 165 - -
Phac4g00327 342 NCBIfam homeobox domain, ZF-HD class 197 254 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00327 Phac-Chr4 4173928 4175774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00327 1 253 ZF-HD Transcription Factor Family AT5G15210 52.874 7.24e-75 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Phac4g00327 ZF-HD_dimer 4.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00327 - - gmx:100814730 445.277