Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00326 ATGGGAAGGCCACCTTGTTGTGATAAAGGTGTGAAGAAAGGACCTTGGACTCCTGAAGAAGATATCATTTTGGTGTCTTACATACAGGACCATGGTCCTGGCAATTGGAAAGCTGTTCCTGCCAATACTGGGTTGTCAAGGTGCAGTAAGAGTTGCAGACTAAGATGGACTAATTATCTTAGGCCAGGAATCAAAAGGGGTAACTTCACTGAACAAGAGGAGAAGATGATAATCCATCTTCAAGCACTTTTAGGAAACAGATGGGCTGCCATAGCTGCATACCTGCCACAAAGAACAGATAATGACATAAAGAACTTTTGGAACACCTATCTGAAGAAAAAGCTGAACAAATTGGAAGCAAGTGGTTCTGAAGGAAGCTTGGGACAAGTTGGGGTTTCAGTTTCTCAGTCAATGTCTAGAGGTCAGTGGGAAAGAAGGCTTCAAACTGATATTCACATGGCCAAGAAAGCTCTCAGTGAAGCTCTTTCACCGAAGAAGACATCATCATCTACCTTGTTTGCTGAGTTAAATTCAAACCTTTCCAATGATAACACTGGCTCCTTCTACAACTCCACCAAACCAACACAATCCATGAGCTATGCCTCAAGTGCCGACAACATAGCTCGTTTGTTGAAGGGGTGGATGAAAAACACACCAAAATGTGCTGCCACTCAGAACTCCTTCATCAACTTGGTCGGTTCTGACACTGCTTCCAGTGATGAAACAACAAAGGGAAGCACAAACAGAGTCGAATTGTCTGAGACTTTTGAGACCTTGTTTGGTTATGAGTCTTTGGAGTCTTCAAATTCTGAGTTTTCACCGTCTCTTTCTCCTGAGGGCACTCTTTTCCAAGATGAGAGCAAGCCAGATATTGTAGGAATAGACATGCCTTTCTCTTTGCTTGAGAAATGGCTTCTGGATGATACTAGTTGTCAAGAGAAACTTAGCTTCTAG 954 0.4287 MGRPPCCDKGVKKGPWTPEEDIILVSYIQDHGPGNWKAVPANTGLSRCSKSCRLRWTNYLRPGIKRGNFTEQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNFWNTYLKKKLNKLEASGSEGSLGQVGVSVSQSMSRGQWERRLQTDIHMAKKALSEALSPKKTSSSTLFAELNSNLSNDNTGSFYNSTKPTQSMSYASSADNIARLLKGWMKNTPKCAATQNSFINLVGSDTASSDETTKGSTNRVELSETFETLFGYESLESSNSEFSPSLSPEGTLFQDESKPDIVGIDMPFSLLEKWLLDDTSCQEKLSF* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00326 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Phac4g00326 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Phac4g00326 317 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Phac4g00326 317 CDD SANT 68 111 IPR001005 -
Phac4g00326 317 Gene3D - 67 126 - -
Phac4g00326 317 FunFam MYB-related transcription factor 12 65 - -
Phac4g00326 317 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 240 - -
Phac4g00326 317 CDD SANT 15 60 IPR001005 -
Phac4g00326 317 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Phac4g00326 317 Gene3D - 12 65 - -
Phac4g00326 317 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Phac4g00326 317 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Phac4g00326 317 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Phac4g00326 317 SMART sant 12 62 IPR001005 -
Phac4g00326 317 SMART sant 65 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00326 Phac-Chr4 4093349 4095437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00326 1 310 MYB Transcription Factor Family AT5G62470 51.136 3.15e-104 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac4g00326 Myb_DNA-binding 2.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00326 K09422 - gmx:780542 485.337