Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00323 ATGGAGGAGAGGAATGAGATGGAAAAGATTGATGATGTTATGCCAGGATTTCGTTTTCACCCCACTGATGAAGAGCTTGTTGATTTCTATCTCAAGAGAAAAATTCAGCAGAAGTCTCTCCCTATTGAACTGATTAAGCAAGTGGATATCTACAAATATGATCCATGGGACCTTCCAAAGCTGGCAGGCACTGGAGAGAAAGAGTGGTACTTCTACTGTCCAAGGGACAGAAAATACAGGAACAGTGCACGTCCAAATAGGGTCACAAGAGCTGGATTTTGGAAGGCCACTGGAACTGACAGACCTATATATTCCTCTGATGGGAAGTGCATTGGTCTGAAGAAGTCTCTTGTGTTCTACAGAGGAAGAGCTGCCAAAGGGATGAAAACTGATTGGATGATGCATGAGTTTAGGTTGCCTTGCATTTCTGACTCAGCCCCTTCCAAAAAACTCTCAGACAAAAGCCTCCCTCCAACTGATTCATGGGCAATCTGTAGGATATTCAAGAAAACCAACTCCCTTTCCATGGCACAGAAAGCTTTATCACACCCTTGGATCTCTCAGTTATCTGGAAGCATGGTATCTGACATGTTCACACAGGGTGCAACAAACCATCACCTAGGATCACCACCAGCCATTCAGTTTTGTGATGAGAGGCAAGAGTTACACCAAGTCTCCAACAATGACATCAACACCAACTTCACAGCTTCAGATATTCCCAATTACAAACCCATCAACAGCACCACAGTTCCCAAGCCTTCACCAGAAATTCCTGTTTCAGATGGAGACCTTGCTGACAACTTCATATTCTACACAGAACACACCAAGTGCACACTTGATGCCAGTTCCATGCTTTCTCCCAATCCTGACTACATAACATTTCAAGAGCCAAACCAACAACAGTACAGTGTCTTTTCAAACAATCTACCTCATTACATCCAACAAAACATGAGCACAGAAACAGTAACAAAAGAACAAGATTGGGAAACAATTGGGAGAACCACTGGATTTCCCTTCACTTTGCTTCCCCCACATGATGCATGGAAGTCTTCTTCTGTGGCATGGGACTCACCTCCTTGCCCCAGTGACATTTCCACAACCTATTCCACCAATAAATGCTACACTTGA 1128 0.4379 MEERNEMEKIDDVMPGFRFHPTDEELVDFYLKRKIQQKSLPIELIKQVDIYKYDPWDLPKLAGTGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPIYSSDGKCIGLKKSLVFYRGRAAKGMKTDWMMHEFRLPCISDSAPSKKLSDKSLPPTDSWAICRIFKKTNSLSMAQKALSHPWISQLSGSMVSDMFTQGATNHHLGSPPAIQFCDERQELHQVSNNDINTNFTASDIPNYKPINSTTVPKPSPEIPVSDGDLADNFIFYTEHTKCTLDASSMLSPNPDYITFQEPNQQQYSVFSNNLPHYIQQNMSTETVTKEQDWETIGRTTGFPFTLLPPHDAWKSSSVAWDSPPCPSDISTTYSTNKCYT* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00323 375 SUPERFAMILY NAC domain 11 170 IPR036093 GO:0003677|GO:0006355
Phac4g00323 375 FunFam NAC domain-containing protein 35 22 173 - -
Phac4g00323 375 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Phac4g00323 375 Gene3D NAC domain 22 175 IPR036093 GO:0003677|GO:0006355
Phac4g00323 375 ProSiteProfiles NAC domain profile. 13 170 IPR003441 GO:0003677|GO:0006355
Phac4g00323 375 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00323 Phac-Chr4 4060615 4063910 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00323 2 186 NAC Transcription Factor Family AT5G39820 69.500 1.25e-97 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac4g00323 NAM 3.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00323 - - gmx:100777630 641.728