Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00312 ATGGTGGGGAACTTCATACACTATCTATCAACGTTTCTGGCTGGTCTGGTTGTTGGTTTTGTGTCAGCATGGAGGCTCGCACTTCTGAGTGTTGCAGTGATTCCTGGGATTGCTTTTGCTGGTGGATTGTATGCTTACACACTCACTGGCCTCACATCAAAGAGTCGTGAGTCTTATGCAAATGCAGGAATAATAGCTGAGCAGGCCATTGCTCAAGTTAGAACTGTTTACTCTTATGTTGGGGAGAGCAAGGCACTGAATTCTTATTCTGATGCAATACAAAACACTCTAAAACTTGGATACAAGGCAGGAATGGCCAAAGGGTTAGGCCTAGGATGCACATATGGAATAGCATGCATGTCTTGGGCACTGGTTTTCTGGTATGCCGGAGTTTTCATCAGGAATGGACAAACCGATGGAGGCAAGGCATTCACGGCTATTTTCTCAGCCATTGTTGGTGGCATGAGTTTGGGACAGTCCTTTTCCAACTTAGGTGCTTTCAGCAAAGGCAAAGCAGCGGGATACAAATTGATGGAGATCATCAATCAGAAACCCACCATAGTGGAAGATTCATCAGAAGGAAAGTGCCTAGCTGATGTTAATGGCAACATTGAATTTAAAGATGTTACTTTCAGCTACCCTTCGAGACCGGATGTGTTTATCTTTCGCAGTTTCTCAATCTTTTTCCCTGCTGGAAAAACTGTTGCGGTTGTTGGTGGCAGTGGATCTGGAAAGAGCACAGTTGTTTCCTTGATAGAAAGGTTCTACGATCCAAATGAAGGTCAGGTTCTGCTGGATAATGTGGACATCAAGAGTCTACAACTAAAATGGTTACGTGATCAAATTGGGTTGGTGAATCAAGAACCTGCACTCTTTGCTACTACCATTCTTGAGAATATACTCTATGGAAAAGCTGATGCAACTATGGCTGAGGTGGAAGCTGCTACTTCTGCTGCAAATGCTCATAGTTTTATCACCTTGCTTCCTAATGGTTATAACACTCAGGTAGGGGAGCGAGGAGTTCAATTATCTGGGGGCCAAAAGCAGAGAATTGCAATTGCCAGAGCCATGTTGAAGAACCCAAAGATCCTTCTACTAGATGAAGCAACTAGTGCTCTTGATGCAGGGTCTGAAAGCATAGTTCAAGAGGCACTAGACAGGCTCATGGTTGGAAGAACAACTGTGGTTGTGGCACATCGTCTATCAACCATAAGGAATGTTGATACCATTGCAGTTATACAACAAGGACAAGTTGTTGAGACAGGCACACATGAAGAACTCATTGCCAAGACAGGCACTTATGCTTCACTCATTCGGTTCCAAGAAATGGTTGGAAATAGAGACTTCTCCAACCCATCAACCCGCCGGACTCGGTCATCGCGATTGAGCCATTCATTGTCAACTAAGTCCTTAAGTCTCAGGTCTGGAAGCCTGAGGAACTTGAGCTACCAGTATAGCACTGGTGCCGATGGCCGTATTGAGATGATATCAAATGCTGAAACAGACAAGAAAAATCCTGCCCCAGATGGATATTTCTTCAGGTTGCTCAAGCTGAATGCTCCTGAGTGGCCTTACTCAATCATGGGAGCTGTTGGTTCTGTTCTTTCTGGATTCATTGGCCCTACTTTTGCTATTGTTATGAGCAACATGATTGAGGTCTTTTACTTCAGAAATTATGCTTCCATGGAGAGGAAGACTAAGGAGTATGTCTTCATTTACATCGGTGCCGGTCTCTATGCAGTTGGTGCATACTTGATACAACATTACTTCTTTAGTATCATGGGAGAAAACCTCACCACAAGGGTCAGAAGAATGATGCTTGCCGCTATTTTGAGGAATGAAGTTGGATGGTTCGATGAGGAGGAGCACAACTCAAGCCTTGTTGCAGCTCGCCTTGCCACTGATGCAGCTGATGTCAAGTCTGCAATTGCTGAGAGGATATCAGTGATTCTGCAGAACATGACATCTCTCCTTACTTCTTTTATAGTTGCTTTCATAGTGGAATGGAGGGTTTCCTTGCTCATCTTGGCAACCTTCCCTCTACTTGTGCTAGCCAACTTTGCTCAGCAATTATCTCTAAAAGGGTTTGCTGGAGACACTGCAAAGGCTCATGCAAAGACAAGTATGATAGCAGGGGAGGGAGTGAGCAACATCAGAACAGTTGCAGCATTCAATGCTCAAACCAAGATGTTATCTGTGTTCTGCAATGAGCTTCGAGTGCCTCAGCGCCAGAGTCTGCGGCGGAGCCTCACATCCGGCTTCTTGTTCGGTCTCTCTCAGCTTGCCCTCTATGCCTCAGAGGCTCTCATTCTATGGTACGGTGCACATTTGGTGAGCAGAGGTGCTTCAACCTTCTCAAAGGTCATCAAGGTGTTTGTGGTGCTCGTGATCACGGCAAATTCAGTGGCGGAAACCGTCAGCCTGGCGCCGGAGATAATCCGCGGCGGGGAGGCCGTGGGGTCGGTGTTCTCAATCCTTGATCGGTCGACAAGGATTGACCCGGATGATCCTGATGCTGACCCGGTGGAGTCTCTGCGCGGGGAGATCGAGCTGAGGCATGTCGATTTTGCGTACCCTTCAAGGCCTGATGTGATGGTGTTCAAGGATTTGAGTCTGAGGATCCGTGCAGGGCAGAGCCAGGCTCTTGTGGGGGCAAGTGGATCAGGGAAGAGCTCTGTGATTGCTCTGATAGAGAGATTCTACGACCCTATTGCAGGGAAAGTGATGGTGGATGGGAAGGACATAAGGAAGTTGAACCTGAAGTCTCTGAGGCTGAAGATAGGGCTGGTGCAGCAAGAGCCAGCACTTTTTGCAGCAAGCATTTTCGAGAACATTGCATATGGAAAAGATGGTGCAAGTGAGGGTGAGGTGATAGAGGCTGCACGTGCAGCCAATGTGCATGGCTTTGTGAGTGGCTTGCCAGAGGGTTACAAGACCCCTGTTGGTGAGAGAGGAGTGCAGCTTTCTGGAGGGCAGAAGCAGAGGATTGCCATTGCCAGGGCAGTGCTTAAGGACCCTACAATTCTCCTTCTGGATGAGGCCACAAGTGCCCTTGATGCAGAGTCGGAGTGTGTGCTACAAGAAGCCTTGGAGAGGCTAATGAGGGGTCGCACCACAGTGCTTGTGGCTCATCGTTTGTCCACCATTAGAGGGGTGGATTGCATCGGAGTGGTTCAAGATGGGCGCATTGTGGAGCAGGGTAGCCATGCAGAGCTTGTGAGCAGGCCAGAGGGGGCATATTCTAGACTCTTGCAGCTGCAACATCATCACATATGA 3276 0.4762 MVGNFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIINQKPTIVEDSSEGKCLADVNGNIEFKDVTFSYPSRPDVFIFRSFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNEGQVLLDNVDIKSLQLKWLRDQIGLVNQEPALFATTILENILYGKADATMAEVEAATSAANAHSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDTIAVIQQGQVVETGTHEELIAKTGTYASLIRFQEMVGNRDFSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMISNAETDKKNPAPDGYFFRLLKLNAPEWPYSIMGAVGSVLSGFIGPTFAIVMSNMIEVFYFRNYASMERKTKEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILATFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQTKMLSVFCNELRVPQRQSLRRSLTSGFLFGLSQLALYASEALILWYGAHLVSRGASTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSVFSILDRSTRIDPDDPDADPVESLRGEIELRHVDFAYPSRPDVMVFKDLSLRIRAGQSQALVGASGSGKSSVIALIERFYDPIAGKVMVDGKDIRKLNLKSLRLKIGLVQQEPALFAASIFENIAYGKDGASEGEVIEAARAANVHGFVSGLPEGYKTPVGERGVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHAELVSRPEGAYSRLLQLQHHHI* 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00312 1091 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 169 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g00312 1091 SUPERFAMILY ABC transporter transmembrane region 508 833 IPR036640 GO:0005524|GO:0016020
Phac4g00312 1091 Gene3D ABC transporter type 1, transmembrane domain 506 815 IPR036640 GO:0005524|GO:0016020
Phac4g00312 1091 Gene3D ABC transporter type 1, transmembrane domain 816 838 IPR036640 GO:0005524|GO:0016020
Phac4g00312 1091 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 851 1085 IPR003439 GO:0005524
Phac4g00312 1091 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 527 814 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g00312 1091 Gene3D - 194 442 IPR027417 -
Phac4g00312 1091 Gene3D - 839 1088 IPR027417 -
Phac4g00312 1091 PANTHER ABC TRANSPORTER B FAMILY 2 539 IPR039421 -
Phac4g00312 1091 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 441 IPR027417 -
Phac4g00312 1091 FunFam ABC transporter B family member 19 194 442 - -
Phac4g00312 1091 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 204 440 IPR003439 GO:0005524
Phac4g00312 1091 CDD ABC_MTABC3_MDL1_MDL2 204 441 - -
Phac4g00312 1091 SUPERFAMILY ABC transporter transmembrane region 2 189 IPR036640 GO:0005524|GO:0016020
Phac4g00312 1091 FunFam ABC transporter B family member 19 839 1088 - -
Phac4g00312 1091 FunFam ABC transporter B family member 19 816 838 - -
Phac4g00312 1091 Gene3D ABC transporter type 1, transmembrane domain 2 456 IPR036640 GO:0005524|GO:0016020
Phac4g00312 1091 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 839 1087 IPR027417 -
Phac4g00312 1091 CDD ABC_6TM_Pgp_ABCB1_D2_like 516 832 - -
Phac4g00312 1091 Pfam ABC transporter 868 1016 IPR003439 GO:0005524
Phac4g00312 1091 ProSitePatterns ABC transporters family signature. 988 1002 IPR017871 GO:0005524|GO:0016887
Phac4g00312 1091 CDD ABC_6TM_Pgp_ABCB1_D1_like 2 177 - -
Phac4g00312 1091 FunFam ABC transporter B family member 1 506 815 - -
Phac4g00312 1091 Pfam ABC transporter transmembrane region 527 798 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g00312 1091 Pfam ABC transporter transmembrane region 3 154 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g00312 1091 SMART AAA_5 231 417 IPR003593 GO:0016887
Phac4g00312 1091 SMART AAA_5 876 1062 IPR003593 GO:0016887
Phac4g00312 1091 CDD ABC_MTABC3_MDL1_MDL2 849 1087 - -
Phac4g00312 1091 ProSitePatterns ABC transporters family signature. 343 357 IPR017871 GO:0005524|GO:0016887
Phac4g00312 1091 Pfam ABC transporter 226 371 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00312 Phac-Chr4 3976133 3985620 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00312 528 1088 Calmodulin-binding Proteins AT2G36910 39.330 2.63e-123 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00312 K05658 - gmx:100797124 1996.48