Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00307 ATGAGAATGAAAATTGCAATTGGTGCTGCTAATGGCCTTGCATTTTTACACGAGGAAGCTTCAAGGCCAATAATATTTCCAGATTTTAAGACATCTAAGATCCTATTGGATATGGACTACAATGCAAAACTTTGGGACTTTGGTCTTGTTCGAGAAATTCATGTAACAACTAAAGTAGTTGTAACAAAAGGCTATGAAGCCCCTGAGTATTTGATGTCAGGCCACCTTACTTCTGAGAGCAATGTATATAGCTTTGGGATTGTTCTGCTTGAAATGTTAACAGGAAGAAGAGCCTTGGATCAAACAATGGCTACAGAAGAGCAAAACTTGGTAGAATGGTTGAGACCCCATCTAAAAAACAAGGCAAATTTTCATTATTTGATGGATCCTAGACTTGAAGGGCAATACCCTACAAAATGTGCTCATAGAACAATGAGGATAGCTACTCATTGTCTTCGTCTAGACCCTAAAACAAGACCCCTTATGAGTGAAGTAGTTCATAAGTTGAAGTATTTGCATGATGAGATGGTTAGTGAGGTTGGTCCCTCAACCTCACTTGGTAGAATGGATGTAGGCCCTTCCAACCATGGTAGTGCTAACAAGTATGGCTTTGGAATAGGTTCATCACCAAATGTTTTAAGGTGCTTTCAAGCTTCACCACAGCACCAATACTACCCTCTTCCTCTACCTCCACCTCCATCAAATCCTTGGCTTGGATCTTCATCTAACTCTTAG 735 0.4014 MRMKIAIGAANGLAFLHEEASRPIIFPDFKTSKILLDMDYNAKLWDFGLVREIHVTTKVVVTKGYEAPEYLMSGHLTSESNVYSFGIVLLEMLTGRRALDQTMATEEQNLVEWLRPHLKNKANFHYLMDPRLEGQYPTKCAHRTMRIATHCLRLDPKTRPLMSEVVHKLKYLHDEMVSEVGPSTSLGRMDVGPSNHGSANKYGFGIGSSPNVLRCFQASPQHQYYPLPLPPPPSNPWLGSSSNS* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00307 244 PANTHER OS01G0588500 PROTEIN-RELATED 1 172 - -
Phac4g00307 244 ProSiteProfiles Protein kinase domain profile. 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00307 244 Pfam Protein kinase domain 6 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00307 244 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 1 180 - -
Phac4g00307 244 Gene3D Transferase(Phosphotransferase) domain 1 1 183 - -
Phac4g00307 244 SUPERFAMILY Protein kinase-like (PK-like) 2 175 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00307 Phac-Chr4 3875073 3876815 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00307 2 172 Glycoside Hydrolase AT3G07070 48.023 2.88e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac4g00307 Pkinase 4.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00307 - - var:108344548 401.364