Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00306 ATGGGGAGCATTGGTGGTATTGAGGCTGGTAAATTCAATGAAGGAAAGAAAAACAAAGATGTTGCTCAAGGTACCATTGAAGAAGGTTCAAGTTTTTGGAAGAAATTGAAGATTTTTCTGGGTTGCATGATTCTCAGTTCAAAAGAGAAAGGAAACTCCAGTGACAAAAGCACACAAGGAAGAAATGTTAGAAAAGATATTGTTAGGCAGAAGAGGTCAAAAAGAACTTCATCCACCAACGAAGACGAGGAGGAATTCATTGCAAATTCTTACAATCTTCGGAGGTTCACTTTTCACGATATTCAGAATGCAACAAGCAATTTTGATTCCAGAACTTTTCTTGGTAGGGGAGGTTTTGGAACTGTGTTCAAAGGTTGGGTTGATGAAAGAGAGAACTATGCAGCAACACCTGCAACAAGAATTCCAGTAGCAGTGAAGACTCTAAACCCAAATGGATTTCAAGGTCATAAACAATGGCTTGCTGAAATTAAGTATCTGGGTGAACTGTATCATCCAAATCTAGTAAGATTGGTGGGCTATTGCATGGAGGAAGATAAAAGGGCACTCATATACGAATACATGTGTCGAGGAAGCTTAGAGAAGTATCTGTTCCAAAGAGGAACTATGCGACTTCCATGGCGTATCAGGCTGAAAATTGCAATGGATGCTGCTAATGGTCTGACATTTTTGCACGAAGAAGCTTCACGAGCAGTGATATTTCGAGATTTCAAGACATCCAATATCCTATTGGACAAGGACTTCAATGCAAAGCTTTCAGACTTTGGGTTTGCAAAAGATGCTCCAGTGGGAGATAAAAATCATGTATCTACAGAGGTCATGGGAACAGAAGGCTATATAGCCCCTGAGTATGTGATGACAGGACACCTTACATCCAAGAGTGATGTGTACAGCTTTGGGATGGTTCTCCTTGAAATGCTGACAGGAAGAAGAGCTGTGGATCAAAAGAGGCCTGCAAAAGAGAAAAACTTGGTAGATTGGTTGCGTCCTCGTATTAGGAGCAAAGAAGGTTTTCATCATGTGATGGATCCTAGATTTGAAGGCCAATATCCAATTAAACATGCCTATAGGGCAATGAAGTTGGTGGTTCACTGTCTTCGCCATGATCCAACAGCAAGACCCCTTATGAGTGAAGTGGTTGCAGAGTTGAAGTCTTTGATAGATGATGGCATGCTTTATGGTCCCTCAAGTTCAGCTACCTCACCTTCAATCCCTTCAACCTCACTTGGGAGAATTCATGTAGGCCCTTCCAACCATGCTGCTGCTAACAGGTATGGCCTTAGAAATAGTTCAGAACCAAACGTTCCATCACGTTTTCAAGCCTCACCACTGAGCCTAGATAGCCCTCTAACTCCACCTTCTCAGAATCCCAGTGTTGAACCCTAA 1404 0.4202 MGSIGGIEAGKFNEGKKNKDVAQGTIEEGSSFWKKLKIFLGCMILSSKEKGNSSDKSTQGRNVRKDIVRQKRSKRTSSTNEDEEEFIANSYNLRRFTFHDIQNATSNFDSRTFLGRGGFGTVFKGWVDERENYAATPATRIPVAVKTLNPNGFQGHKQWLAEIKYLGELYHPNLVRLVGYCMEEDKRALIYEYMCRGSLEKYLFQRGTMRLPWRIRLKIAMDAANGLTFLHEEASRAVIFRDFKTSNILLDKDFNAKLSDFGFAKDAPVGDKNHVSTEVMGTEGYIAPEYVMTGHLTSKSDVYSFGMVLLEMLTGRRAVDQKRPAKEKNLVDWLRPRIRSKEGFHHVMDPRFEGQYPIKHAYRAMKLVVHCLRHDPTARPLMSEVVAELKSLIDDGMLYGPSSSATSPSIPSTSLGRIHVGPSNHAAANRYGLRNSSEPNVPSRFQASPLSLDSPLTPPSQNPSVEP* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00306 467 SUPERFAMILY Protein kinase-like (PK-like) 86 389 IPR011009 -
Phac4g00306 467 MobiDBLite consensus disorder prediction 429 459 - -
Phac4g00306 467 Gene3D Transferase(Phosphotransferase) domain 1 194 398 - -
Phac4g00306 467 ProSitePatterns Protein kinases ATP-binding region signature. 114 146 IPR017441 GO:0005524
Phac4g00306 467 ProSiteProfiles Protein kinase domain profile. 108 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00306 467 MobiDBLite consensus disorder prediction 1 21 - -
Phac4g00306 467 CDD STKc_IRAK 114 392 - -
Phac4g00306 467 Pfam Protein tyrosine and serine/threonine kinase 113 389 IPR001245 GO:0004672|GO:0006468
Phac4g00306 467 MobiDBLite consensus disorder prediction 402 467 - -
Phac4g00306 467 MobiDBLite consensus disorder prediction 49 82 - -
Phac4g00306 467 MobiDBLite consensus disorder prediction 402 419 - -
Phac4g00306 467 MobiDBLite consensus disorder prediction 59 82 - -
Phac4g00306 467 PANTHER OS01G0588500 PROTEIN-RELATED 72 391 - -
Phac4g00306 467 FunFam Serine/threonine-protein kinase PBS1 194 404 - -
Phac4g00306 467 Gene3D Phosphorylase Kinase; domain 1 76 193 - -
Phac4g00306 467 FunFam Serine/threonine-protein kinase BIK1 74 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00306 Phac-Chr4 3849097 3853379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00306 60 392 Glycoside Hydrolase AT3G07070 46.269 1.19e-102 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac4g00306 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00306 - - vum:124826044 725.317