Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00305 ATGGGGAGCATTGGTGGTATTGAGGCTGGTAAATTCAATGAAGGAAAGAAAAACAAAGATGTTGCTCAAGGTACCATTGAAGAAGGTTCAAGTTTTTGGAAGAAATTGAAGATTTTTCTGGGTTGCATGATTCTCAGTTCAAAAGAGAAAGGAAACTCCAGTGACAAAAGCACACAAGGTGAAGAAGGAAGAAATGTTAGAAAAGATATTGTTAGGCAGAAGAGGTCAAAAAGAACTTCATCCACCAACGAAGACGAGGAGGAATTCATTGCAAATTCTTACAATCTTCGGAGGTTCACTTTTCACGATATTCAGAATGCAACAAGCAATTTTGATTCCAGAACTTTTCTTGGTAGGGGAGGTTTTGGAACTGTGTTCAAAGGTTGGGTTGATGAAAGAGAGAACTATGCAGCAACACCTGCAACAAGAATTCCAGTAGCAGTGAAGACTCTAAACCCAAATGGATTTCAAGGTCATAAACAATGGCTTGCTGAAATTAAGTATCTGGGTGAACTGTATCATCCAAATCTAGTAAGATTGGTGGGCTATTGCATGGAGGAAGATAAAAGGGCACTCATATACGAATACATGTGTCGAGGAAGCTTAGAGAAGTATCTGTTCCAAAGAGGAACTATGCGACTTCCATGGCGTATCAGGCTGAAAATTGCAATGGATGCTGCTAATGGTCTGACATTTTTGCACGAAGAAGCTTCACGAGCAGTGATATTTCGAGATTTCAAGACATCCAATATCCTATTGGACAAGGACTTCAATGCAAAGCTTTCAGACTTTGGGTTTGCAAAAGATGCTCCAGTGGGAGATAAAAATCATGTATCTACAGAGGTCATGGGAACAGAAGGCTATATAGCCCCTGAGTATGTGATGACAGGACACCTTACATCCAAGAGTGATGTGTACAGCTTTGGGATGGTTCTCCTTGAAATGCTGACAGGAAGAAGAGCTGTGGATCAAAAGAGGCCTGCAAAAGAGAAAAACTTGGTAGATTGGTTGCGTCCTCGTATTAGGAGCAAAGAAGGTTTTCATCATGTGATGGATCCTAGATTTGAAGGCCAATATCCAATTAAACATGCCTATAGGGCAATGAAGTTGGTGGTTCACTGTCTTCGCCATGATCCAACAGCAAGACCCCTTATGAGTGAAGTGGTTGCAGAGTTGAAGTCTTTGATAGATGATGGCATGCTTTATGGTCCCTCAAGTTCAGCTACCTCACCTTCAATCCCTTCAACCTCACTTGGGAGAATTCATGTAGGCCCTTCCAACCATGCTGCTGCTAACAGGTATGGCCTTAGAAATAGTTCAGAACCAAACGTTCCATCACGTTTTCAAGCCTCACCACTGAGCCTAGATAGCCCTCTAACTCCACCTTCTCAGAATCCCAGTGTTGAACCCTAA 1413 0.4204 MGSIGGIEAGKFNEGKKNKDVAQGTIEEGSSFWKKLKIFLGCMILSSKEKGNSSDKSTQGEEGRNVRKDIVRQKRSKRTSSTNEDEEEFIANSYNLRRFTFHDIQNATSNFDSRTFLGRGGFGTVFKGWVDERENYAATPATRIPVAVKTLNPNGFQGHKQWLAEIKYLGELYHPNLVRLVGYCMEEDKRALIYEYMCRGSLEKYLFQRGTMRLPWRIRLKIAMDAANGLTFLHEEASRAVIFRDFKTSNILLDKDFNAKLSDFGFAKDAPVGDKNHVSTEVMGTEGYIAPEYVMTGHLTSKSDVYSFGMVLLEMLTGRRAVDQKRPAKEKNLVDWLRPRIRSKEGFHHVMDPRFEGQYPIKHAYRAMKLVVHCLRHDPTARPLMSEVVAELKSLIDDGMLYGPSSSATSPSIPSTSLGRIHVGPSNHAAANRYGLRNSSEPNVPSRFQASPLSLDSPLTPPSQNPSVEP* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00305 470 MobiDBLite consensus disorder prediction 49 86 - -
Phac4g00305 470 SUPERFAMILY Protein kinase-like (PK-like) 89 392 IPR011009 -
Phac4g00305 470 MobiDBLite consensus disorder prediction 432 462 - -
Phac4g00305 470 Pfam Protein tyrosine and serine/threonine kinase 116 392 IPR001245 GO:0004672|GO:0006468
Phac4g00305 470 CDD STKc_IRAK 117 395 - -
Phac4g00305 470 MobiDBLite consensus disorder prediction 54 85 - -
Phac4g00305 470 MobiDBLite consensus disorder prediction 405 422 - -
Phac4g00305 470 MobiDBLite consensus disorder prediction 1 21 - -
Phac4g00305 470 PANTHER OS01G0588500 PROTEIN-RELATED 75 394 - -
Phac4g00305 470 FunFam Serine/threonine-protein kinase PBS1 197 407 - -
Phac4g00305 470 FunFam Serine/threonine-protein kinase BIK1 77 196 - -
Phac4g00305 470 ProSitePatterns Protein kinases ATP-binding region signature. 117 149 IPR017441 GO:0005524
Phac4g00305 470 Gene3D Transferase(Phosphotransferase) domain 1 197 401 - -
Phac4g00305 470 MobiDBLite consensus disorder prediction 405 470 - -
Phac4g00305 470 Gene3D Phosphorylase Kinase; domain 1 79 196 - -
Phac4g00305 470 ProSiteProfiles Protein kinase domain profile. 111 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00305 Phac-Chr4 3849039 3853379 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00305 63 395 Glycoside Hydrolase AT3G07070 46.269 1.26e-102 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac4g00305 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00305 - - vum:124826044 726.472