Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00304 ATGGGGAGCATTGCTGGTATTAGGGTTGGTTCTACAATTGGGGACAAATCCAATGGAGGGAGAAACAACAAAGATGTTGTTCAAGGTGAAGAAGGTTCAAGGTTTTTGAAGAAATTGAGAATTTTCTTATGTTGCATGCTTTGGAGTTCCAAAGGAGAACCTTCCTCCAGAAACAAAATCAATCAAGCTAATGGAGAAAATGCTACCAATGATGTTGATGAACAGCAACAAATTGCCCCAACATCCTCATCCAACACAAGGTTAAGTAGCTATGAAACATGGTGTGTTCCAGATCAAGAATTGTTTGAAGCTTCTTTGCTTCTTCGGAGGTTCACCTTTCATGATCTTATGTTGGCAACAAGAACTTTTAAGGTTGAGAATTTTCATGATGAAGAAGGGTTTGGAATTTTGTTGAAAGGTTGGATTAATCCATATGGGAACTATGCAGCAAGGCCTGGAACAGGAATCCCAGTTGCAGTGAGGGCTTTCAACTCAAATGAATTTCAACATCACAAGGAATGGCTTGATGAAATTATTTATCTTAGTCAACTCCATCATTTAAATGTGGTTAAATTAGTAGGGTTTTGCCTTGAGGATGACAAAAGGGTACTTGTATATGAGCATATATGTGAAGGAAGTTTAGAGAAGCATCTTTTCAAGAGTATGTTTTTAATGTATTTATTTATCCATTATTCATGTTAG 702 0.3704 MGSIAGIRVGSTIGDKSNGGRNNKDVVQGEEGSRFLKKLRIFLCCMLWSSKGEPSSRNKINQANGENATNDVDEQQQIAPTSSSNTRLSSYETWCVPDQELFEASLLLRRFTFHDLMLATRTFKVENFHDEEGFGILLKGWINPYGNYAARPGTGIPVAVRAFNSNEFQHHKEWLDEIIYLSQLHHLNVVKLVGFCLEDDKRVLVYEHICEGSLEKHLFKSMFLMYLFIHYSC* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00304 233 Pfam Protein tyrosine and serine/threonine kinase 136 220 IPR001245 GO:0004672|GO:0006468
Phac4g00304 233 MobiDBLite consensus disorder prediction 1 26 - -
Phac4g00304 233 ProSiteProfiles Protein kinase domain profile. 123 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00304 233 Gene3D Phosphorylase Kinase; domain 1 98 208 - -
Phac4g00304 233 SUPERFAMILY Protein kinase-like (PK-like) 92 223 IPR011009 -
Phac4g00304 233 MobiDBLite consensus disorder prediction 52 84 - -
Phac4g00304 233 PANTHER OS01G0588500 PROTEIN-RELATED 77 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00304 Phac-Chr4 3843045 3844882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00304 39 219 Glycoside Hydrolase AT3G07070 30.939 1.07e-20 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac4g00304 PK_Tyr_Ser-Thr 4.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00304 - - vum:124826039 319.316