Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00303 ATGCACCTTACATGGCCTATGAGAATGAAAATTGCAATTGGTGCTGCTAATGGCATGTCATTTTTGCATGAGGAAGCTTCAAGACCATTAATATTTCGAGATTTTAAGACATCTAGTATCCTATTGGATAAGGATTACAACACAAAACTTTGGGACTTTGGTCTTGTAAAAGATGCTCCAATGGGACATGAAATCCATGAAACAACTAAAGTGGTGGGATCAAAAGGCTATGAAGCCCCTGAGTATATGATGACAGGACACCTTACTTCGAAGAGCAATGTTTATAGTTTTGGTTTGGTTCTACTTGAACTGTTGACAGGAAGAAGAGCTGTAGATCAAACAATGCCTACAGAGGAGCAAAACCTAATAGAATGGTTGAGGCCTCGTCTTAGGAACAGAGCAAATTTTCATTATTTGATGGATCCTAGACTTGAAGGCCAATACCCTACAAAATTTGCTCATAAAACAATGAGGTTAGCTATTCATTGTCTTCGCCTTGACCCAAAAACAAGACCCCTTATGAGTGAAGTAGTTCGTGAGTTGAAGTGTTTGCATGATGACATGGTTGGTGCCTCCACCTCAGCTTCCTCAACCTCACTTGGGAGAATTCATATAGGTCCATTCAACCATGTTGGTGCTTGCAAGTATGACCTTGGAATAGGTTCATCATCAAATTTTCGAAGGTGCTTTCAACCCTTTCCACAGTGCCAAGAATATCCTCTACCCTTACCTCCATCTCCACCAAATCCAATAGTTACATCTTCATCTAATCCTAAGTTGGAACTTCATCCAACTTAG 798 0.4023 MHLTWPMRMKIAIGAANGMSFLHEEASRPLIFRDFKTSSILLDKDYNTKLWDFGLVKDAPMGHEIHETTKVVGSKGYEAPEYMMTGHLTSKSNVYSFGLVLLELLTGRRAVDQTMPTEEQNLIEWLRPRLRNRANFHYLMDPRLEGQYPTKFAHKTMRLAIHCLRLDPKTRPLMSEVVRELKCLHDDMVGASTSASSTSLGRIHIGPFNHVGACKYDLGIGSSSNFRRCFQPFPQCQEYPLPLPPSPPNPIVTSSSNPKLELHPT* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00303 265 MobiDBLite consensus disorder prediction 244 265 - -
Phac4g00303 265 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 1 194 - -
Phac4g00303 265 ProSiteProfiles Protein kinase domain profile. 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00303 265 Pfam Protein kinase domain 11 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00303 265 SUPERFAMILY Protein kinase-like (PK-like) 2 183 IPR011009 -
Phac4g00303 265 PANTHER OS01G0588500 PROTEIN-RELATED 3 185 - -
Phac4g00303 265 Gene3D Transferase(Phosphotransferase) domain 1 1 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00303 Phac-Chr4 3827896 3830587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00303 3 184 Glycoside Hydrolase AT3G07070 49.451 5.77e-60 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac4g00303 Pkinase 2.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00303 - - pvu:PHAVU_004G027200g 480.715