Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00292 ATGGGGTTTGGGAGCAATGCAGTTCAAGCAGGGAGTTTGGATGTGGAAAAGTCAAAGGGCAAGAAGAACAAGGAAGGTGGTGGGAAGGAGAGAAAATGGGGATTTAGATTTAGCCTCTTTGGGAGTTGCATACCTTCAAGATCAAAAGTTGATAGCACCACCATTAGTGGCACCAGTGCTCCTAATAATGGTGAAAATGTCAAGTCAGTGATAACTGAATCAGAGGAAAACAAATCTGCATCTGATAGAATCACAAAGGAAACAGTTGCTCCTCCAGAGTCCTCTACGACAACTACTGATGCAGAAAGTAACCCTTCCACACCAATATTCAGTGAGGAGCTGAAGGTTGCTTCTAGCTTGAGAAAATTCACATTCAATGGACTTAAGGTGGCAACTAGGAATTTTAGACCAGAGAGTCTTCTTGGTGAAGGAGGGTTTGGTTGTGTCTTCAAGGGTTGGATTGAAGAGAATGGAACTGCACCTGTGAAACCAGGTACCGGGCTTACGGTTGCGGTCAAGACCCTCAACCACAATGGACATCAGGGTCACAAAGAGTGGCTTGCTGAGTTGAATTATCTTGGTGATCTTGTCCATCCAAATCTTGTTAAACTGGTTGGTTTCTGTATTGAAGGTGACCAAAGATTACTGGTTTATGAGTTTATGCCCCGAGGCAGTTTGGAGAATCACCTCTTTAGAAGACCCCTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAGGGTCTTGCTTTTCTCCATCAAGAGGCTCAAAGACCCATAATATATCGTGATTTCAAAACATCTAATATACTATTAGATGCGGAATACAATGCCAAGCTCTCTGATTTTGGACTTGCCAAAGATGGTCCCGAGGGGGAAAAGACACATGTATCAACAAGAGTTATGGGAACATATGGTTATGCTGCTCCCGAGTATGTGATGACTGGACATTTGACATCAAAAAGTGATGTCTACAGCTTTGGAGTAGTGCTACTTGAAATGCTCACTGGTCGGAGATCTATTGACAAGAAAAGACCAAATGGGGAACACAATCTGGTGGAGTGGGCAAGACCTGTTCTTGGAGATCGGAGGATGTTCTACCGGATAATTGACCCCCGCCTCGAAGGCCACTTCTCGGTTAAAGGGGTGCAAAAAGCTGTGCAGCTTGCTGCTCAATGCCTTAGCCGTGATCCAAAATCCCGACCCTTGATGAGTGAAGTTGTTCAAGCTTTAAAGCCTTTACCAAGCCTCAAGGACATGGCTATCTCATCTTATCACTTCCAGATTGCTCGAGTAGACCGAACCATGTCCATGCCGAATCATAAAAACGGCATTAGAACACAGTTAGTATCTGTGCCAAGGAAGGGTCAAGCTGTAAGGACATTGTCTAGTTCAAATGTTCCACATGGTTCTCCATATATTCGATATACCAAGTCTCCAAAACCTATTGGGTAA 1467 0.4417 MGFGSNAVQAGSLDVEKSKGKKNKEGGGKERKWGFRFSLFGSCIPSRSKVDSTTISGTSAPNNGENVKSVITESEENKSASDRITKETVAPPESSTTTTDAESNPSTPIFSEELKVASSLRKFTFNGLKVATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHNGHQGHKEWLAELNYLGDLVHPNLVKLVGFCIEGDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHQEAQRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKKRPNGEHNLVEWARPVLGDRRMFYRIIDPRLEGHFSVKGVQKAVQLAAQCLSRDPKSRPLMSEVVQALKPLPSLKDMAISSYHFQIARVDRTMSMPNHKNGIRTQLVSVPRKGQAVRTLSSSNVPHGSPYIRYTKSPKPIG* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00292 488 MobiDBLite consensus disorder prediction 45 70 - -
Phac4g00292 488 Pfam Protein tyrosine and serine/threonine kinase 139 415 IPR001245 GO:0004672|GO:0006468
Phac4g00292 488 CDD STKc_IRAK 141 418 - -
Phac4g00292 488 Gene3D Transferase(Phosphotransferase) domain 1 221 435 - -
Phac4g00292 488 MobiDBLite consensus disorder prediction 43 108 - -
Phac4g00292 488 MobiDBLite consensus disorder prediction 88 108 - -
Phac4g00292 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Phac4g00292 488 Gene3D Phosphorylase Kinase; domain 1 115 220 - -
Phac4g00292 488 SUPERFAMILY Protein kinase-like (PK-like) 117 415 IPR011009 -
Phac4g00292 488 ProSitePatterns Protein kinases ATP-binding region signature. 141 173 IPR017441 GO:0005524
Phac4g00292 488 PANTHER OS01G0588500 PROTEIN-RELATED 88 418 - -
Phac4g00292 488 MobiDBLite consensus disorder prediction 15 30 - -
Phac4g00292 488 FunFam Serine/threonine-protein kinase BIK1 102 220 - -
Phac4g00292 488 ProSiteProfiles Protein kinase domain profile. 135 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00292 488 FunFam Probable serine/threonine-protein kinase PBL8 221 434 - -
Phac4g00292 488 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00292 Phac-Chr4 3712754 3717208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00292 92 431 Glycoside Hydrolase AT3G07070 53.061 2.44e-118 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac4g00292 PK_Tyr_Ser-Thr 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00292 - - gmx:100499647 864.759