Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00276 ATGCATATTGCATCACCATTACATAATTCACTCTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGTTTCTCATTTCACCAAAATGGGAAGGCCTCCTTGTTGTGACAAATCCAATGTGAAAAGGGGTCTTTGGACTCCTGAGGAAGATGCTAAAATACTTGCCTATGTAGCCAATCATGGAACTGGAAACTGGACATTGGTTCCAAAGAAAGCAGGGCTGAATAGGTGTGGTAAAAGCTGCAGGCTCAGATGGACCAACTATCTGAGACCTGACCTCAAGCATGATAGTTTTACTCCCCAAGAAGAAGAGCTCATTATTAACCTTCATGGAGCCATAGGAAGCAGATGGTCTTTGATTGCAAGAAGATTACCTGGGAGAACAGACAATGATGTGAAGAACTACTGGAACACAAAGCTAAGGAAGAAGCTTATGAAGATGGGAATTGATCCAGTGACTCATAAGCCAGTATCACAGGTCCTCTCTGACTTGGGAAGCATTAGTGGCCTCCCTAACAGCACCACCACTAACCAAGTGGCCTTTGTTAACAAGGACTTGATGATGAGCAACATGGTACCAACCAAAACTGAACCATCAGGTTCCAATAAGTCAATGGTGGAGAACACACAAGAGGGTCAAGTTCACTCATGGGAACACCACTTTCCTTACCAAGTCCTCACCACAGAAAATGTTCAACCACATGTCTTCAGTGAAGCTGCATCCTCCACCTCATCCTCATCTTCCTCCAACCTCTCACACTTAGGCTCACCAAAGTCCTACTCTTGCCAAACCCCTCATTGTTCCTCCTTTGATTGGAGTGAGTTTCTTCACAGTGACTCATTTATGTGGTCACTGAACCCCTCAAGTCTGGTGCAAAGTGAAGCTGATCTTTCCATCAATGCCAAAAGCAATGGCCATGACAAACAAGGAGTTGCTTCAATTGAGGGTTGTTGTGGTGCAGGCATGGAATATCAAATTAAAAAGCAATGTGAAGGTCATTCATTTGTAGATGGTATTTTGGACAGGGACAGTGAGTTAAGAGCAGCATTCCCTGAACTTTTGGATGCTTCTTTTGACTACTAA 1101 0.4342 MHIASPLHNSLSPSSSSSSSSSSSSSSSVSHFTKMGRPPCCDKSNVKRGLWTPEEDAKILAYVANHGTGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLKHDSFTPQEEELIINLHGAIGSRWSLIARRLPGRTDNDVKNYWNTKLRKKLMKMGIDPVTHKPVSQVLSDLGSISGLPNSTTTNQVAFVNKDLMMSNMVPTKTEPSGSNKSMVENTQEGQVHSWEHHFPYQVLTTENVQPHVFSEAASSTSSSSSSNLSHLGSPKSYSCQTPHCSSFDWSEFLHSDSFMWSLNPSSLVQSEADLSINAKSNGHDKQGVASIEGCCGAGMEYQIKKQCEGHSFVDGILDRDSELRAAFPELLDASFDY* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00276 366 PANTHER F14D16.11-RELATED 35 366 - -
Phac4g00276 366 Pfam Myb-like DNA-binding domain 103 144 IPR001005 -
Phac4g00276 366 Pfam Myb-like DNA-binding domain 48 95 IPR001005 -
Phac4g00276 366 CDD SANT 103 146 IPR001005 -
Phac4g00276 366 MobiDBLite consensus disorder prediction 1 46 - -
Phac4g00276 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 99 IPR017930 -
Phac4g00276 366 Gene3D - 102 165 - -
Phac4g00276 366 SUPERFAMILY Homeodomain-like 45 142 IPR009057 -
Phac4g00276 366 ProSiteProfiles Myb-like domain profile. 43 95 IPR001005 -
Phac4g00276 366 MobiDBLite consensus disorder prediction 7 33 - -
Phac4g00276 366 FunFam Transcription factor RAX3 41 101 - -
Phac4g00276 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 150 IPR017930 -
Phac4g00276 366 SMART sant 100 148 IPR001005 -
Phac4g00276 366 SMART sant 47 97 IPR001005 -
Phac4g00276 366 Gene3D - 41 101 - -
Phac4g00276 366 ProSiteProfiles Myb-like domain profile. 96 146 IPR001005 -
Phac4g00276 366 FunFam transcription factor MYB80 103 163 - -
Phac4g00276 366 CDD SANT 51 95 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00276 Phac-Chr4 3552087 3553847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00276 35 366 MYB Transcription Factor Family AT3G28470 50.291 8.54e-89 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac4g00276 Myb_DNA-binding 4.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00276 K09422 - gmx:100815077 588.571