Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00260 ATGTTACTGAGAATAACACAACCCTCACCTTTTTTATGTGTGCTGCTTTTGGACCCCACCACTTCACCACTCTCTCGTCCCTATAAATTTCACCATAACGTTGCAGCAATATTGAATAACAAGGCCACTGAGAGGGTCTTTAAAGCAAGACAGAAGAAGAAGGAGCCGCAGGGTAGAGCTCAGAGAATCTCACTGTTGGTTGTTTCTGAGGAACTTATAACTAAAGGGTTGCACCAAATGGGTGGTGGTGGTGGTGGTGACCATAATAGTTCTGGTTCCATGGCTGTGAAGAACAAGAAGAGTAGTGGCTCTATTCGATCCATTTTTATGCATGCTGATGGCCAAGATATGTTTCTCATGATTTTGGGAATGATTGGAGCCATTGGTGATGGCATAGGCACCCCTTTGGTGTTGTTTATCACCAGCAAAATTATGAACAATATTGGTAGTTTTTCTGGTGGAATAGATAGCTCTTTCGTCCATGCCATCAATCAGAATGCTGTGGTTTTGTTATATTTGGCTAGTGGGTCTTTTGTCGCTTGTTTTCTAGAGGGTTATTGTTGGACAAGAACTGGTGAAAGACAAGCTGCGAGAATGAGAGTGAGATACCTAAAGGCAGTGTTGAGGCAAGAAGTTGCATACTTTGACTTGCATGTCAGTAGCACATCTGAGGTCATCACCAGTGTCTCTAATGACAGCCTCGTAATTCAAGATGTTCTCAGTGAAAAGGTTCCAAATTTTTTGATGAATGCCTCTATGTTTGTGGGGAGCTACATAGTGGGTTTTGCATTATTATGGAGATTGACCCTTGTGGGGTTCCCTTTTGTGGCTCTACTTGTGATCCCTGGTTTTATGTATGGGAGGACCCTAATGGGGTTGGCTAGCAAGATAAGAGAAGAGTACAACAAGGCTGGTACAATAGCAGAACAGGCAATATCTTCCATCAGAACCGTCTACTCCTTTGTGGGAGAAAGCAAGACAATAGACGCTTTCTCTGATGCTCTACAAGGATCAGTAGAGTTAGGACTCAGACAAGGCTTGGCAAAAGGCTTAGCTATTGGAAGCAATGGTGTTGTGTTTGCTATTTGGGCTTTCATATCCTATTATGGTAGCAGATTGGTCATGTACCATGGTGCTAAAGGTGGAACTGTCTTTGCAGTTGGTGCAGCCATAGCACTTGGAGGATTGGCCTTAGGTGCTGGTTTGTCGAACGTGAAGTACTTCTCAGAGGCAAGCAGTGCAGGAGAACGCATAATGGAAGTGATAAAAAGGGTTCCGAAGATTGATTCAGAGAACATGGGTGGGGAGATTCTGGAGGAGGTTGGTGGGGAAGTGGAGTTTGTGCATGTGGACTTTGTGTACCCTTCAAGGCCTGACAGTGTGATTCTGAAGGATTTTAGCCTGAGGGTTCCTGCAGGGAAAACAGTGGCACTGGTTGGAGGGAGTGGCTCGGGAAAATCCACTGTGATATCACTTCTGCAGAGGTTCTATGACCCAGTTGAGGGAGAGATACGTGTTGATGGTGTGGCCATTCATAGGTTGCAACTCAAGTGGTTGAGGTCTCAAATGGGGTTGGTGAGTCAAGAGCCTGCACTGTTTGCAACCACCATTAAGGAGAATATACTCTTTGGAAGAGAAGATGCCACTGAGGAAGAGGTTATCGAGGCTGCAAAAGCTTCCAATGCTCATACTTTCATCTCACACTTGCCACAAGGATATCATACTCAGGTGGGGGAGAGAGGAGTTCAAATGTCAGGGGGACAAAAGCAAAGAATTGCTATAGCACGAGCAATAATAAAGAAGCCACGAATTCTCTTGCTAGATGAAGCAACAAGTGCCCTGGATTCTGAATCCGAACGAGTTGTGCAAGAAGCATTGGACAAAGCAGCAGTGGGGCGCACCACCATCATCATTGCTCATCGATTATCCACCATAAGAAACGCAGATGTGATTGCTGTGGTGCAGAGTGGGAAGATCATGGAAATGGGGTCACATCATCAACTCATCCAAAACGACAATGGCCTTTACACCTCACTGGTTCGTCTCCAACAAGCAAAAGATGAGAGAGAAGACACCCCTTTTCACCCTCATGCATCCTCATCATCATCCATATCAAACAAGGACAATCACAACACAAGCAGCCGGAGGCTTTCTCTTGTGAGTCAATCTAGCTCTGCCAACTCAATGCCTCGTGTTGGTGGTGGTGATGATGTTGTTGAAGAGGTTGTTGTGGAAGACAAGAAGCTGCCACTTCCCTCCTTTCGAAGATTGCTGGCACTGAATGTTCCTGAGTGGAAGCAAGCATGTATGGGGTGTTTGAATGCAGTGTTGTTTGGTGCAATACAGCCTGTGTATGCATTTTCAATGGGGTCTGTGATATCTGTTTACTTTCTCCAAGACCATGATGAGATAAAGGAGAAAACCAGGATCTACTCGCTCTGTTTTCTAGGGTTGGCTGTGTTCTCTTTGGTGGTTAATATCCTCCAACACTATAACTTTGCTTACATGGGAGAGTACCTAACCAAAAGGATCAGAGAACGAATGCTTTCCAAGATACTCACTTTTGAAGTTGGATGGTTCGATCAAGATGAAAATTCCACTGGTGCTGTTTGTTCTAGACTTGCCAAAGAAGCCAATGTGGTAAGGTCTTTGGTGGGAGACAGATTGGCACTAGTGGTGCAAACCATTTCTGCAGTGGTGATAGCTTTCACTATGGGCCTAGTCATTGCATGGAGGTTGGCCATTGTTATGATAGCAGTTCAACCCATTATCATAGCCTGCTTCTACACAAGACGTGTCCTTCTCAAGAGCATGTCTAGCAAGGCCATCAAGGCCCAAGATGAAAGTAGCAAGATAGCTGCAGAAGCTGTTTCCAACCTTAGAACCATCACAGCATTTTCTTCCCAAGAGAGAATCCTAAAGATGCTTGAAAAGGCTCAAGAGGGACCAAGTCATGAAAGCATTCGGCAATCATGGTTTGCAGGTGTTGGTCTTGCTTGTTCCCAAAGCCTTACATTTTGTACTTGGGCCTTAGACTTTTGGTATGGAGGAAAGCTTGTGTTTCAAGGGGTCATCAATGCCAAAGCATTGTTTGAGACCTTCATGATCTTGGTGAGCACAGGTAGGGTGATTGCAGATGCTGGCAGCATGACCAATGACCTTGCCAAAGGGGCTGATGCTGTGGGCTCTGTTTTTACAATCCTAGATAGGTACACAAAAACTGAGCCTGATGACATAGATGGGTACAAGCCTGAAAAATTAACAGGGAAAATAGAGCTTCATGACGTCCATTTTGCATACCCAGCTAGGCCCAATGTGATGATCTTTCAAGGCTTCTCAATCAAAATAGATGCAGGCAAATCAACAGCATTGGTAGGGCAAAGTGGTTCTGGCAAATCAACTATAATAGGCCTAATAGAGAGATTCTATGACCCCCTGAAAGGGATAGTGACCATAGATGGTAGAGACATAAAATCATATCACCTTAGGTCAATAAGGAAGCACATTGGTCTGGTAAGCCAAGAGCCAACATTGTTTGGTGGGACCATAAGGGAAAATATTGCATATGGAGCATCTAACAAGGTTGATGAAACTGAGATCATAGAAGCAGCAAGAGCAGCTAATGCTCATGATTTCATTTCAAGCCTAAAGGAGGGCTATGAAACATGGTGTGGCGACAGAGGAGTTCAACTCTCAGGGGGTCAAAAGCAAAGAATTGCAATAGCAAGAGCCATATTGAAGAACCCAGAAGTGTTGTTGCTGGATGAAGCCACCAGTGCTCTTGATAGCCAATCAGAGAAATTGGTGCAAGATGCTCTAGACAGGGTGATGGTAGGGAGAACTAGTGTGGTGGTGGCTCACAGGTTAAGCACAATACAGAACTGTGATCTAATTGCTGTGTTAGACAAGGGAAAAGTGGTGGAGAAAGGGACTCACTCATCTTTGTTGGCTCAGGGACCTAGTGGAGCTTATTACTCTTTGGTGAGTTTACAAAGAAGACCAACAAAACATGAAGGTTAA 4020 0.4468 MLLRITQPSPFLCVLLLDPTTSPLSRPYKFHHNVAAILNNKATERVFKARQKKKEPQGRAQRISLLVVSEELITKGLHQMGGGGGGDHNSSGSMAVKNKKSSGSIRSIFMHADGQDMFLMILGMIGAIGDGIGTPLVLFITSKIMNNIGSFSGGIDSSFVHAINQNAVVLLYLASGSFVACFLEGYCWTRTGERQAARMRVRYLKAVLRQEVAYFDLHVSSTSEVITSVSNDSLVIQDVLSEKVPNFLMNASMFVGSYIVGFALLWRLTLVGFPFVALLVIPGFMYGRTLMGLASKIREEYNKAGTIAEQAISSIRTVYSFVGESKTIDAFSDALQGSVELGLRQGLAKGLAIGSNGVVFAIWAFISYYGSRLVMYHGAKGGTVFAVGAAIALGGLALGAGLSNVKYFSEASSAGERIMEVIKRVPKIDSENMGGEILEEVGGEVEFVHVDFVYPSRPDSVILKDFSLRVPAGKTVALVGGSGSGKSTVISLLQRFYDPVEGEIRVDGVAIHRLQLKWLRSQMGLVSQEPALFATTIKENILFGREDATEEEVIEAAKASNAHTFISHLPQGYHTQVGERGVQMSGGQKQRIAIARAIIKKPRILLLDEATSALDSESERVVQEALDKAAVGRTTIIIAHRLSTIRNADVIAVVQSGKIMEMGSHHQLIQNDNGLYTSLVRLQQAKDEREDTPFHPHASSSSSISNKDNHNTSSRRLSLVSQSSSANSMPRVGGGDDVVEEVVVEDKKLPLPSFRRLLALNVPEWKQACMGCLNAVLFGAIQPVYAFSMGSVISVYFLQDHDEIKEKTRIYSLCFLGLAVFSLVVNILQHYNFAYMGEYLTKRIRERMLSKILTFEVGWFDQDENSTGAVCSRLAKEANVVRSLVGDRLALVVQTISAVVIAFTMGLVIAWRLAIVMIAVQPIIIACFYTRRVLLKSMSSKAIKAQDESSKIAAEAVSNLRTITAFSSQERILKMLEKAQEGPSHESIRQSWFAGVGLACSQSLTFCTWALDFWYGGKLVFQGVINAKALFETFMILVSTGRVIADAGSMTNDLAKGADAVGSVFTILDRYTKTEPDDIDGYKPEKLTGKIELHDVHFAYPARPNVMIFQGFSIKIDAGKSTALVGQSGSGKSTIIGLIERFYDPLKGIVTIDGRDIKSYHLRSIRKHIGLVSQEPTLFGGTIRENIAYGASNKVDETEIIEAARAANAHDFISSLKEGYETWCGDRGVQLSGGQKQRIAIARAILKNPEVLLLDEATSALDSQSEKLVQDALDRVMVGRTSVVVAHRLSTIQNCDLIAVLDKGKVVEKGTHSSLLAQGPSGAYYSLVSLQRRPTKHEG* 1340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00260 1339 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 121 410 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g00260 1339 FunFam ABC transporter B family member 4 435 690 - -
Phac4g00260 1339 CDD ABC_6TM_Pgp_ABCB1_D1_like 120 418 - -
Phac4g00260 1339 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 775 1056 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g00260 1339 FunFam Putative ABC transporter B family member 8 734 1079 - -
Phac4g00260 1339 Gene3D - 435 684 IPR027417 -
Phac4g00260 1339 FunFam ABC transporter B family member 1 107 441 - -
Phac4g00260 1339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1083 1331 IPR027417 -
Phac4g00260 1339 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1091 1328 IPR003439 GO:0005524
Phac4g00260 1339 ProSitePatterns ABC transporters family signature. 1231 1245 IPR017871 GO:0005524|GO:0016887
Phac4g00260 1339 CDD ABC_6TM_Pgp_ABCB1_D2_like 758 1073 - -
Phac4g00260 1339 SUPERFAMILY ABC transporter transmembrane region 748 1075 IPR036640 GO:0005524|GO:0016020
Phac4g00260 1339 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 448 681 IPR003439 GO:0005524
Phac4g00260 1339 FunFam ABC transporter B family member 4 1081 1337 - -
Phac4g00260 1339 SUPERFAMILY ABC transporter transmembrane region 114 426 IPR036640 GO:0005524|GO:0016020
Phac4g00260 1339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 438 683 IPR027417 -
Phac4g00260 1339 CDD ABC_MTABC3_MDL1_MDL2 445 683 - -
Phac4g00260 1339 SMART AAA_5 1118 1311 IPR003593 GO:0016887
Phac4g00260 1339 SMART AAA_5 472 658 IPR003593 GO:0016887
Phac4g00260 1339 Pfam ABC transporter 463 612 IPR003439 GO:0005524
Phac4g00260 1339 ProSitePatterns ABC transporters family signature. 584 598 IPR017871 GO:0005524|GO:0016887
Phac4g00260 1339 MobiDBLite consensus disorder prediction 686 734 - -
Phac4g00260 1339 Gene3D ABC transporter type 1, transmembrane domain 735 1079 IPR036640 GO:0005524|GO:0016020
Phac4g00260 1339 Pfam ABC transporter 1110 1259 IPR003439 GO:0005524
Phac4g00260 1339 MobiDBLite consensus disorder prediction 696 730 - -
Phac4g00260 1339 MobiDBLite consensus disorder prediction 79 98 - -
Phac4g00260 1339 CDD ABC_MTABC3_MDL1_MDL2 1091 1331 - -
Phac4g00260 1339 Pfam ABC transporter transmembrane region 120 387 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g00260 1339 Pfam ABC transporter transmembrane region 770 1038 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g00260 1339 Gene3D ABC transporter type 1, transmembrane domain 108 690 IPR036640 GO:0005524|GO:0016020
Phac4g00260 1339 Gene3D - 1081 1338 IPR027417 -
Phac4g00260 1339 PANTHER ABC TRANSPORTER B FAMILY 91 820 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00260 Phac-Chr4 3431678 3439722 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00260 104 1332 Calmodulin-binding Proteins AT2G36910 45.294 0.0 1069
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00260 K05658 - gmx:100807709 2116.66