Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00239 ATGCAAGGCATTGTCCATGGGAAAGAAGCTCCCACAGTTGCAGGTGCATGGCCAATACTTGGTCACCTTCCACTGTTGAGTGGTTCAAAGACACCCCATAAAACTTTGGGTGCTTTGGCTGACAAATATGGACCCATTTTCACCATCAAACTTGGTGTCAAAAGGGCTTTGGTAATCAACAACTGGGAAACTGCAAAGGAATGTTTTACCACAAACGACATAGTCGTTTCCTCTCGCCCCAAGCTTGTTGCCACTGAACACATGAGCTACAACCAAGCCATGTTTGCCTTGGCACCCTATGGTCCCTATTGGCGAAAAATAAGAAAGATTACAGTTTCAGAGATTCTCTCCCCTCAGCGAGTGAAGCAACTACGTCATGTTTTTGAGTCAGAAGTTGAAGGTTCGATAAAGGAGCTCTTTAAGTTTTGGTGTAGCAACAAGAATGAGTGCGGCTATGCCTTGGTGGAGTTGAAGCAATGGTTTTCTCATTTGATATTCAACATGGTCCTTCAAATGGTTATAGGGAAGCGATATTTTAGTGCAGCAACTGTGGATGATGAGAAGGCACAGAGATGTGTGAAGGCTGTGGAGGAGTTCATGCGTCTGTTGGGGGTGTTCGTAGTGGGAGATGCTGTTCCATGGTTGAGATGGTTTGATTTTGGAGGGCATGAGAAGGCAATGAAAGAAACTGCGAAAGAGTTGGATATTGTTATAAGTGAGGAGTTAGAGGAACATAGAAAGAAGAAGGGTTTGGGTGAGAAGGTTGATGAAGCTCAAGATTTCATGAATGTAATGATTTCCTTGTTTGATGGAAGAACTATTGATGGGCACGATGCAGATTCCGTCATCAAATCCACAGTTATGACAGTGATTGTAGGAGGAACTGACACAAGTAATACTGTTCTTATGTGGGCAATATCTTTGATTTTGAGAAATCCTTTGGTATTGGAAAAAGTAAAAGTTGAACTAGATATTCATGTTGGAAAAGAGAAATGTGTAAGTGAGTCTGATATAAGTAAGTTAACATATCTTCAAGCCATAGTCAAGGAAACTTTAAGATTGTATCCTCCTGGTCCTCTTTCGGCACCTCATGAAATTATAGAGGACTGCACTTTAAGTGGTTATAATATAAAAAAAGGAACTCGTCTAATCACAAATCTCTGGAAGATTCACACGGATAGTAATGTTTGGGAAGATCCATTGGAGTTCAAACCAGAAAGATTTCTTACAACTCACAAAAATATTGACGTCAAAGGTCATCATTTTGAGTTATTACCATTCGGAGTTGGCAGAAGAATGTGTCCAGGAATATCCTTAGGACTTGAAATAGTGCATTTCTCTCTTGCTAGTTTTTTGCATTCTTTTGAAATTTTAAGCTCATCACCTGATCCTATTGACATGACCGAAACCTTTGGATTAACCAACACCAAAGCCACTCCACTTGAGATTCTTATTAACCCACGGAAAGAGCCTCCCACAGTTGCAGGTGCATGGCCAATACTTGGTCACCTTCCATTGATGAGTGGTTCAAAGTCACCCCACAGAACTCTGGGTGCTTTGGCTGACAAATATGGACCCATTTTCACCATCAAACTTGGTTCCAAAAGGGCTGTGGTAATCAACAACTGGGAAATAGCAAAGGAATGCTTCACCACAAACGACACAGCCGTTTTCGGTCGCCCCAAGCTTGTTTCGGTGGAACTCATGAGCTACAACCAAGCCATGTTTGCCTTGGCACCCTATGGTCCCTATTGGCGAAAAATAAGAAAGCTTACAGTTTCAGAGATTCTCTCCCCTCAGCGAGTGAAGCAACAACGTCATGTTTTTGAGTCAGAAGTTCAAGAATCGATCAAGGAGCTCTTCAACTTTTGGCGCAGCAACAAGAACGAGAGCGGCTATGCCTTGGTGGACTTGAAGCAATGGTTTTCTCATTTGATATTCAACATGGTCCTTCAAATGATTACAGGGAAGCGATATTTCAGTGCAGCAACTGTGGACGATGAGAAGGCACAGAGATGTGTTAGGACAGTGGAGGAGTTGATGCGTCTGATGGGGTTGTTCACACTGGGAGATGCTGTTCCTTGGTTGAGACGGTTTGATCTTGGAGGCAATGAGAAGGCAATGAAAGAAATTGCGAAAGAGTTGGATATTATTCTTGGTGAGGAGTTAGAGGAACACAGAAAAAGGAAGGGTTTGGGTGAAGCTCAAGATTTCATTGATGTCATGATTTCCTTGTTCGATGGAACAACTACTGATGGGGTCGATGCAGATACCGTTATCAAATCCACCATACTGACATTGATTGCAGGAGGAACTGACACAAGTAGTGTTGTTCTTACGTGGGCAATGTGTTTGATTTTGGGAAATCCTTTGGTGTTGGAAAAAGTGAAAGTCGAACTAGACATTCATGTTGGAAAAGAGAAATGTGTAAGTGAGTCTGATATAAGTAAGTTAACATATCTTCAAGCCATAGTCAAAGAAACTTTAAGATTATATCCTCCTGGTCCTCTTGCGACACCTCGTGAATTCACAGAGAATTGCACTTTAGGTGGTTATAATATAAAAAAAGGAACTCGACTAATTACAAATCTTTGGAAGATTCACACAGACAAGAATGTTTGGGAAGATCCATTGGAGTTCAAACCTGAAAGGTTTCTTACAACTTACAAAGATATCGATGTCAAAGGTCATCATTTTGAGCTAATACCATTTGGAGGTGGTAGAAGAATGTGTCCAGGAATATCCTTTGGCCTTGAAGTAGTGCAATTCTCTCTTGCTAGTGTTTTGCACTCTTTTGAATTTTTAAGTTCATCACCCGATCCTATTGACATGACCGAAAACTTTGGATTAGCCAACACCAAAGCCACTCCACTTGAGATTCTTATTAAACCACACCTATCATTTAGGAAAGAAGCTCCCACAGTTGCAGGTGCATGGCCAATACTTGGTCACCTTCCATTGTTGAGTGGTTCAAAGACACCCCATAGAACTTTGGGTGCTTTGGCTGACAAATATGGACCCATTTTCACCATCAAACTTGGTGCCAAAAGGGCTTTGGTAATCAACAACTGGGAAACGGCAAAGGAATGTTTTACCACAAACGACACAGTCGTTTCCTCTCGCCCCAAGCTTGTTGCCGCTGAACACATGAGCTACAACCAAGCCATGTTTGTGGTAGCACCCTATGGTCCCTATTGGCGAAAAATAAGAAAGATTACAGTTTCAGAGATTCTCTCCCCTCAGCGAGTGAAGCAGCTACGTCATGTTTTTGAGTCAGAAGTTCAAGAATCGATCAAGGAGCTCTTTGACTTTTGGTGTAGCAACAAGAATGAGAGCGGCTATGCCTTGGTGGACTTGAAGCAATGGTTTTCTCATTTGATATTCAACATGGTCCTTCAAATGATTACAGGGAAGCGATATTTTAGTGCAGCACCTGTGGATGATGAGAAGGCACGGAGATTTGTGAGGGCTATGGAGGAGTTCATGCGTCTGTTTGGGGTGTTCACAGTGGGAGATGCTGTTCCATGGTTGAGATGGTTTGATTTCGGAGGGCATGAGAAGGCAATGAAAGAAACTGCGAAAGAGTTGGATAGTATTATAGGTGAGGAGTTAGAGGAACATAGAAAAAGGAAGGGTTTGGGTGAGAAGGATGATGAAGTTCAAGATTTCATGGATGTAATGATTTCCTTGTTCGATGGAACAACTACTGATGGGGTCGATGCAGATACCGTAATCAAATCCACCCTGCTGGCAATAATTGCAGGAGGAACTGACACAAGTAGTATTGTTCTTACGTGGGCAATATCTTTGATTTTGAGGAATCCTTTGATATTGGAAAAAGTAAAAGTGGAACTAGACATTCATATTGGAAAAGAGAAATGCGTAAGTGAGTTTGATATAAGTAAGTTAACATATCTTCAAGCCATAGTCAAGGAAACTTTAAGATTGTATCCTCCTGCTCCTCTTTCGACGCCTCGTGAATTCATAGAGGACTGCATTTTAAGTGGTTATAATATAAAAAAAGGAACTCGTCTAATCACAAATCTTTGGAAGATTCACACAGATAGTAATGTTTGGGAAGATTCATTGGAGTTCAAACCAGAAAGATTTCTTACAACTCACAAAAATATTGATGTCAAAGGTCATCATTTTGAGCTATTACCATTTGGAGGTGGCAGAAGAATGTGTCCAGGAATATCCTTTGGCATTGAAGTAGTGCATTTCTCTCTTGCTAGTTTTTTGCATTCTTTTGAAATTTTAAGCTCATCACCTAATCCTATTGACATGACCGAAAACTTTGGATTAACCAACACCAAAGCCACTCCACTTGAGATTCTCATTAAACCACGTCTATCTTTTATAAACTTACCTATGTTAGTGCAATTCCTATATATATATGCACACTGTGGCTAA 4413 0.4115 MQGIVHGKEAPTVAGAWPILGHLPLLSGSKTPHKTLGALADKYGPIFTIKLGVKRALVINNWETAKECFTTNDIVVSSRPKLVATEHMSYNQAMFALAPYGPYWRKIRKITVSEILSPQRVKQLRHVFESEVEGSIKELFKFWCSNKNECGYALVELKQWFSHLIFNMVLQMVIGKRYFSAATVDDEKAQRCVKAVEEFMRLLGVFVVGDAVPWLRWFDFGGHEKAMKETAKELDIVISEELEEHRKKKGLGEKVDEAQDFMNVMISLFDGRTIDGHDADSVIKSTVMTVIVGGTDTSNTVLMWAISLILRNPLVLEKVKVELDIHVGKEKCVSESDISKLTYLQAIVKETLRLYPPGPLSAPHEIIEDCTLSGYNIKKGTRLITNLWKIHTDSNVWEDPLEFKPERFLTTHKNIDVKGHHFELLPFGVGRRMCPGISLGLEIVHFSLASFLHSFEILSSSPDPIDMTETFGLTNTKATPLEILINPRKEPPTVAGAWPILGHLPLMSGSKSPHRTLGALADKYGPIFTIKLGSKRAVVINNWEIAKECFTTNDTAVFGRPKLVSVELMSYNQAMFALAPYGPYWRKIRKLTVSEILSPQRVKQQRHVFESEVQESIKELFNFWRSNKNESGYALVDLKQWFSHLIFNMVLQMITGKRYFSAATVDDEKAQRCVRTVEELMRLMGLFTLGDAVPWLRRFDLGGNEKAMKEIAKELDIILGEELEEHRKRKGLGEAQDFIDVMISLFDGTTTDGVDADTVIKSTILTLIAGGTDTSSVVLTWAMCLILGNPLVLEKVKVELDIHVGKEKCVSESDISKLTYLQAIVKETLRLYPPGPLATPREFTENCTLGGYNIKKGTRLITNLWKIHTDKNVWEDPLEFKPERFLTTYKDIDVKGHHFELIPFGGGRRMCPGISFGLEVVQFSLASVLHSFEFLSSSPDPIDMTENFGLANTKATPLEILIKPHLSFRKEAPTVAGAWPILGHLPLLSGSKTPHRTLGALADKYGPIFTIKLGAKRALVINNWETAKECFTTNDTVVSSRPKLVAAEHMSYNQAMFVVAPYGPYWRKIRKITVSEILSPQRVKQLRHVFESEVQESIKELFDFWCSNKNESGYALVDLKQWFSHLIFNMVLQMITGKRYFSAAPVDDEKARRFVRAMEEFMRLFGVFTVGDAVPWLRWFDFGGHEKAMKETAKELDSIIGEELEEHRKRKGLGEKDDEVQDFMDVMISLFDGTTTDGVDADTVIKSTLLAIIAGGTDTSSIVLTWAISLILRNPLILEKVKVELDIHIGKEKCVSEFDISKLTYLQAIVKETLRLYPPAPLSTPREFIEDCILSGYNIKKGTRLITNLWKIHTDSNVWEDSLEFKPERFLTTHKNIDVKGHHFELLPFGGGRRMCPGISFGIEVVHFSLASFLHSFEILSSSPNPIDMTENFGLTNTKATPLEILIKPRLSFINLPMLVQFLYIYAHCG* 1471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00239 1470 CDD CYP82 525 964 - -
Phac4g00239 1470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 904 913 IPR017972 GO:0005506|GO:0016705
Phac4g00239 1470 PRINTS P450 superfamily signature 1308 1319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 PRINTS P450 superfamily signature 770 787 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 PRINTS P450 superfamily signature 1387 1396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 1389 1398 IPR017972 GO:0005506|GO:0016705
Phac4g00239 1470 Gene3D Cytochrome P450 5 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 Gene3D Cytochrome P450 486 965 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Phac4g00239 1470 PANTHER CYTOCHROME P450 82C3-RELATED 7 488 - -
Phac4g00239 1470 Pfam Cytochrome P450 495 951 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 Pfam Cytochrome P450 14 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 Pfam Cytochrome P450 976 1438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 SUPERFAMILY Cytochrome P450 492 964 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 Gene3D Cytochrome P450 966 1453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 FunFam Cytochrome P450 82C4 486 963 - -
Phac4g00239 1470 PRINTS E-class P450 group I signature 164 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 PRINTS E-class P450 group I signature 64 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 PRINTS E-class P450 group I signature 40 59 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 PRINTS E-class P450 group I signature 302 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 PRINTS E-class P450 group I signature 345 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 CDD CYP82 44 488 - -
Phac4g00239 1470 FunFam Cytochrome P450 82C4 3 485 - -
Phac4g00239 1470 SUPERFAMILY Cytochrome P450 16 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 FunFam Cytochrome P450 82C4 965 1448 - -
Phac4g00239 1470 SUPERFAMILY Cytochrome P450 978 1450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac4g00239 1470 CDD CYP82 1006 1450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00239 Phac-Chr4 3247579 3291667 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00239 492 966 Cytochrome P450 AT4G31940 46.817 1.08e-149 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00239 - - cmax:111476389 837.025