Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00231 ATGGAGGAATACCTTTGGTGTTTCAGTGCAATTCATAAAAAAAAAATACCATGGCGTGTGGTCGTCGTGTTGGAAAACTCTGAATCCGCGATTGCTTCTAGAATCTTCTATTTGAATTCATTGTGTTATATTGAATATTCTTCAAATGTGTTCTTCAGTTTTTCGATCTTTCACAGAACTCAGAACCCTATTGGTATATCCATGGCATCAGGTGGAACCGAAACTTTTCCAGATTTGGGTAAAAATTGCCAGCACCGCGACTGCAACCACCTCGATTTTCTTCCTTACATCTGCGACGGTTGCCAACGAGTGTTTTGTTCGGAGCACAGATCTTACAAGTCCCACGCATGCCCGAAATCTGACCTAAGCAGAAAAGTGATTGTTTGCCAAACATGTTCCATGTCCATTGAGACCACCGGCTACGTGGGACAAGACGAAGATGCAATCTTGGAGAAGCACCACAAGTCTGGGAACTGTGATCCCACCAACAAGAAGAAACCCATTTGCCCTGTCAAGGGGTGCAAGGAGATTTTATCAATATCCAACACCAGCACATGTAAAACTTGCCACCTGAAGGTGTGCCTCAGACACCGTTTTCCTTCTGATCATGCTTGTAGCAGAGGAGTTTCAGCTTCTGCTTTATCTTCTGCTTCTGATGGTGGGTGGAAGAATTTTCTTAGCTGCTTTTGTTTCAAAACAGAACAACAGAAAAGGCCATAA 720 0.4333 MEEYLWCFSAIHKKKIPWRVVVVLENSESAIASRIFYLNSLCYIEYSSNVFFSFSIFHRTQNPIGISMASGGTETFPDLGKNCQHRDCNHLDFLPYICDGCQRVFCSEHRSYKSHACPKSDLSRKVIVCQTCSMSIETTGYVGQDEDAILEKHHKSGNCDPTNKKKPICPVKGCKEILSISNTSTCKTCHLKVCLRHRFPSDHACSRGVSASALSSASDGGWKNFLSCFCFKTEQQKRP* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00231 239 Gene3D - 67 131 IPR035896 -
Phac4g00231 239 Gene3D - 145 220 IPR035896 -
Phac4g00231 239 SUPERFAMILY AN1-like Zinc finger 161 208 IPR035896 -
Phac4g00231 239 ProSiteProfiles Zinc finger AN1-type profile. 163 213 IPR000058 GO:0008270
Phac4g00231 239 SUPERFAMILY AN1-like Zinc finger 73 119 IPR035896 -
Phac4g00231 239 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 75 211 - -
Phac4g00231 239 SMART AN1_Zf_4 83 122 IPR000058 GO:0008270
Phac4g00231 239 SMART AN1_Zf_4 169 210 IPR000058 GO:0008270
Phac4g00231 239 ProSiteProfiles Zinc finger AN1-type profile. 77 125 IPR000058 GO:0008270
Phac4g00231 239 Pfam AN1-like Zinc finger 169 206 IPR000058 GO:0008270
Phac4g00231 239 Pfam AN1-like Zinc finger 83 120 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00231 Phac-Chr4 3177463 3179063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00231 68 217 C2H2 Transcription Factor Family AT3G28210 60.265 7.13e-63 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00231 - - var:108345238 350.903