Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00216 ATGCATGGGTGTGGTGGTGACCAGTGGAAACACAATCGGCACATGTGGCCTGTACCTGCTAACGCGACCACTGTAGCCATCGATTCTTCACCGTCTCAATTTATATGCAAAGATGGACGCAAGATTCGCGCTGGTGATTGTGCACTCTTCAAGCCACCTAGGGACTCCCCTCCTTTTATTGGAATAATTCGCAAGTTATCGTATGATAAACAAGAAAGTCCAAGTTTAGAAGTGCATTGGCTTTACCGACCTGCTGATTTGAAACTTGCTAAAGGAATTGTGCTGGAAGCTGCACCAAACGAAGTTTTTTACTCCTTTCACAAGGATGAAACACCTGCTGCATCATTACTCCATCCGTGTAAAGTCGCATTTCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCGCATTTGTCTGTCGACGAGTTTATGACATTGAGAACAACTGTTTATGGTGGCTAACTGATAAGGACTACCTTAATGAAGAAGTTAACCAGTTATTAGATAAGACAAAACTAGAAATGCATGGGGCTGTGCAGTCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCAGCATCAACACAGTCATTGAAATCTGGTTCTGACAACATACAAAATAGTTCTTCCTTTGGTGCACAGGGTAAGGGTAAAAAGAGAGAGCGGGATCAGGGTTCGGATTCATCTAAAAAGGAGCGGTTATTTAAGATTGAAGATGGAGACTCTGGTCAGTTTAGACCGGAGAGCATGTTAAAGTCTGAGATTGCTAAAATAACTGATAAAGGTGGGCTTGTGGACTTTGAAGGAGTTGAAAAACTGGTACAGCTTATGCAGCCTGACAGCGCTGATAAAAAAATAGATTTACCTGGGCGGATAATGCTTGTCGATGTAATTGCACTTACAGACCGGTACGATTGTCTGGGTTGGTTTGTACAGCTCAGGGGTTTACCTGTGTTGGATGAATGGCTGCAGGAGGTCCATAAGGGCAAAATTGGTGATGGGAATATGCCCAAAGAAAGTGATAAGTCTGTTGATGAGTTTTTGTTAGCTTTACTGCGTGCATTGGATAAGCTTCCTGTGAACCTTCATGCACTGCAGACCTGTAATGTTGGAAAGTCTGTCAATCATTTACGCACCCACAAAAATGCTGAAATTCAGAGGAAAGCTAGGAGTTTAGTAGACACATGGAAGAGGCGTGTGGAAGCTGAAATGAACATGAATGATTCAAAGTCTGGTTCGAACCGTGCTGTTTCTTGGCCAGCAAAGCCAGCAAACTCCGAGTCTCCTCATGTTGGTAATAGGAAAACAGGGGGATCCTCTGATAACGTTGTGAAGAGCCCTGCTATTCAACCCTCATTATCTAAAAGTTCCCAATCTAAGTTAAGTTCCGGAGAAACTTTGTCCAAGTCTTCATCTCCTGGCTCTACTAAATCATTGACTACCTCAGTGGGCATGAACTCAAAAGATCAAAACAGTAAAGTCTTTGTTGGAGCTGCAACGGCAGATCTGCCTCTGACACCTATCAAAGAGGAGAGGAGCAGCAGTTCCAGTCAATCTCAAAATAACAGTATAACTTGTTCTAGTGAACATGCTAAAACTATTGGTTCTTGCAGGGAAGATGCGAAGAGCTCCACTGCAGTGTCAATGAGTGCGAGTAAAATTCATGGTTGTGCATCTCGAACTCGCAAGTCAAGCAATGGTATACACGGGGCTGGTGCAGTAGGTCAGAAGGAGCACAACTCTGCAAAAATTTCAACCAGAAATTCACCGACTGAGAAAGTATCACCAACTCGAGCATCCCATGAAAAATCAGTTGACCAGCCCCTTGCCGATCAAGGGAATAACCAGCGATTGATTCTCAGGTTGCCAAACACTGGTCGCAGTCCTTCAAGGGGAGCTAGCGGGGGCTCTTTTGAAGAACCAGCAACAACGAGCAGCAAAGCTTTGTCTCCTGCTGACCTGAATGATAATCAGGACAGAAGATTGAAAACTAAGACCGAGTGTTTGCTGACCCATGTGTCAAATATGATGAACGAGTCTTCTGATGCTAATGAAGCTTTGATTGGTGATGAAAATAAGGGCACTCCAATAGTTGATGAGCGATGCAGGGCAATTGAAGATAGCGACAAGGTATTAGAAACATCAAAACCAACTAGTTTGCCATCTGGATTTGTTTCCAGATCAGGGCAGACTTATGATGCTTCTTTAAGCCCCATGAATGCATTGGTTGAAAGCTGTGTAAAATTTTCTGAAGCAAGTTCATCCGTTTCCCATGGAGATGATGGGATGAACCTACTTGCTACTGTGGCTGCAGGGGAAATATCCAGATCGGAAAATGCATCACCTGTGGCATCCCCCGAGAGAAAGTCGTCTCCTGCAGCAGATGAACTGTGCTCTGGCAATGATTTAAAGTTAAAGCATTCTGGTGAAGCAGCTGTTCGCACTCTTTCAGAGTTGAATGGTAGGGCTACAGGAGAGCATCCTTTGAATACAGTTGATTCATCGCAGATAAAAAATGAATTGAGGCATCCTGCCATGACAGTGTCACGTGATTTTCAAGGGGATGGTGAAACCATTTCGTCTTCCCACGATACTCGTATAAATGTCTCCTCTACAGATTTGTTACAAAATGTTGAAGGTCCATGCTTACGGCCCGAAACCATAGAAGATGCTTCTGTAACTATACTGACTCCTAAAAAGGAGAGTAATGCAGACGCTGGAGTTTCAGACTCTAAACTAAAGCCAAGGGCCTCCTCTTTTGATGATGATCAGAAGGTTGATCACATGAATGAGGAGATCATTGAGAATGAGAAAATGTTGGTTTCAAAACCTTTTACAAATGTTGAGTCAGAAAACGAATCAGGTGAAAAGCAGCCTGATTTAACTTCAAGTGTGGATAATGAGAACCAGATTAGTGTGGAGAAAGCAACAGGTACAGGAATACTAGTGCAAAAGACCTCTCCAATTGCTGAAAACTGTGAGTCTATATATTTAAAAAAGGAGTTACCTGCTTCTGGTAATGCTTTAATGGTACCCATGGATGAAAATGCTGAGGACATGAAGTCAGTAGTGATTGAGCCTGACGAAAGACGAAGGGAGCAGGATTCTTCTTCTCCAGATGATTCTAATGATTGTGCTGAAGATAATATGGGCAGAAAAGAGGCCATTGGTCAGTGTTCTGGTTCATCATCAGTTCAGCCAGATTTACAAACAATGTCTAGGAAAGAGAATGAAGTGTCCAAATCATGTGAGCAAAAGCTAGATGCAAATCCGTCTGAAGTTTCAGGAGAGAGGCATGCATGCTCTGCAGCTGGTGCTGATGCAGCTGTAAAACTTGACTTTGATTTAAATGAAGGCTTTCCTTTTGATGACGCAGGCCAAGGGGAGATTGCCAGACAGGAAGATCCTATCACATCATCTGCAGTTCATGTTCCTTGCCCGTTGCCTTTTCCCATTTCGTCCATCTCTGGTGGCTTCCACCCTTCAATTACAGTGGCATCTGCTGCTAAAGGGCCGGTTATTCCACCAGAAAACCCATTGAGGATGAAGGGGGAGCTTGGATGGAAAGGATCTGCTGCTACCAGTGCATTTCGACCAGCTGAACCTAGGAAAAATGCTGAGATGCAGTCCTCTACTAATGATATTACTTCTGTTGAAGTCACTTCTATCAAACAAAGCCGTGCTCCCTTAGATTTTGACTTAAATGTGGCAGATGAAAGATGTTTTGAGGATGTTGGTTCACATGGTTCTTTAGAATCTGGACCACATGATCGTAGTGTGGGACTCGATCTTGATTTAAACAGAGTCGATGACACTCCTGAAATTGGTTCTTTCTCTATAAGCAAACTGGATATTCCTTCTTTACCAAGCAAGCCGTCACTGTCTAGTGGGTTGTCTAATGGTGGAAGTGTCTCAAGAGACTTTGACTTAAATAATGGGCTTGGCCTTGAAGAAGTTGGTAGTGAAGTCCCAGCACGTAGTCAGCTGATGAAAAACAGTGTACCGTTTCCAAGTGCTGTTCATAGCGCAAGAACAAACAATGCTGAATATGGGAATTATTCTGCATGGTTTCCTCCAGGAAATTCCTATCCTGCAATTACTGTCCCGCCACTTCTGCCTGGTAGAGGGGAGCAGAGTTATGTCAGTGGTGCTGGGGCACAAAGAATAATGGGTCCTACAGGTAGCAGTCCTTTCGGTCATGAAATATACAGGGGATCAGTTCTTTCATCCTCTCCGGCTGTTGCTTATCCATCCACTACAGCTTTTCCATATCCTGGATTTCCATTTGAAACCAATTTTCCATTATCCTCAAACTCCTTTTCTGGGTCAACTGCATTTATGGATTCCTCGAATGTGGGCGGGCTATGTTTTCCTACCATGACTTCACAGCCAGTTGGGCCTGGTGGTGTTGTTTCATCCACGTATCCCCGTCCATATGTTATGAGTCTTCCAGGTGGTACTAGTAATGTGATACCTGACAGCAGAAAATGGGGAAGTCAAAGTCTGGATCTTAATTCAGGCCCTGGTGTGGCAGATACAGAACGGAGGGATGATAGATTGCCTTCAGGATTGAGGCAAATGTCTGTCCCGAACACACAAGCCTCGATTGAGGACCACTTGAAGATGTTTCAGATGGCAGGAGCTGCATTGAAAAGAAAAGAGCCTGATGGTGGTTGGGATGCTGAGAGATTCGGTTATAAGCAACACTCACGGCAATAG 4719 0.4399 MHGCGGDQWKHNRHMWPVPANATTVAIDSSPSQFICKDGRKIRAGDCALFKPPRDSPPFIGIIRKLSYDKQESPSLEVHWLYRPADLKLAKGIVLEAAPNEVFYSFHKDETPAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIENNCLWWLTDKDYLNEEVNQLLDKTKLEMHGAVQSGGRSPKPLNGPASTQSLKSGSDNIQNSSSFGAQGKGKKRERDQGSDSSKKERLFKIEDGDSGQFRPESMLKSEIAKITDKGGLVDFEGVEKLVQLMQPDSADKKIDLPGRIMLVDVIALTDRYDCLGWFVQLRGLPVLDEWLQEVHKGKIGDGNMPKESDKSVDEFLLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNAEIQRKARSLVDTWKRRVEAEMNMNDSKSGSNRAVSWPAKPANSESPHVGNRKTGGSSDNVVKSPAIQPSLSKSSQSKLSSGETLSKSSSPGSTKSLTTSVGMNSKDQNSKVFVGAATADLPLTPIKEERSSSSSQSQNNSITCSSEHAKTIGSCREDAKSSTAVSMSASKIHGCASRTRKSSNGIHGAGAVGQKEHNSAKISTRNSPTEKVSPTRASHEKSVDQPLADQGNNQRLILRLPNTGRSPSRGASGGSFEEPATTSSKALSPADLNDNQDRRLKTKTECLLTHVSNMMNESSDANEALIGDENKGTPIVDERCRAIEDSDKVLETSKPTSLPSGFVSRSGQTYDASLSPMNALVESCVKFSEASSSVSHGDDGMNLLATVAAGEISRSENASPVASPERKSSPAADELCSGNDLKLKHSGEAAVRTLSELNGRATGEHPLNTVDSSQIKNELRHPAMTVSRDFQGDGETISSSHDTRINVSSTDLLQNVEGPCLRPETIEDASVTILTPKKESNADAGVSDSKLKPRASSFDDDQKVDHMNEEIIENEKMLVSKPFTNVESENESGEKQPDLTSSVDNENQISVEKATGTGILVQKTSPIAENCESIYLKKELPASGNALMVPMDENAEDMKSVVIEPDERRREQDSSSPDDSNDCAEDNMGRKEAIGQCSGSSSVQPDLQTMSRKENEVSKSCEQKLDANPSEVSGERHACSAAGADAAVKLDFDLNEGFPFDDAGQGEIARQEDPITSSAVHVPCPLPFPISSISGGFHPSITVASAAKGPVIPPENPLRMKGELGWKGSAATSAFRPAEPRKNAEMQSSTNDITSVEVTSIKQSRAPLDFDLNVADERCFEDVGSHGSLESGPHDRSVGLDLDLNRVDDTPEIGSFSISKLDIPSLPSKPSLSSGLSNGGSVSRDFDLNNGLGLEEVGSEVPARSQLMKNSVPFPSAVHSARTNNAEYGNYSAWFPPGNSYPAITVPPLLPGRGEQSYVSGAGAQRIMGPTGSSPFGHEIYRGSVLSSSPAVAYPSTTAFPYPGFPFETNFPLSSNSFSGSTAFMDSSNVGGLCFPTMTSQPVGPGGVVSSTYPRPYVMSLPGGTSNVIPDSRKWGSQSLDLNSGPGVADTERRDDRLPSGLRQMSVPNTQASIEDHLKMFQMAGAALKRKEPDGGWDAERFGYKQHSRQ* 1573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00216 1572 ProSiteProfiles BAH domain profile. 40 155 IPR001025 GO:0003682
Phac4g00216 1572 SMART BAH_4 40 155 IPR001025 GO:0003682
Phac4g00216 1572 MobiDBLite consensus disorder prediction 1056 1073 - -
Phac4g00216 1572 MobiDBLite consensus disorder prediction 1193 1213 - -
Phac4g00216 1572 MobiDBLite consensus disorder prediction 175 246 - -
Phac4g00216 1572 MobiDBLite consensus disorder prediction 1553 1572 - -
Phac4g00216 1572 MobiDBLite consensus disorder prediction 775 800 - -
Phac4g00216 1572 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1572 - -
Phac4g00216 1572 MobiDBLite consensus disorder prediction 607 653 - -
Phac4g00216 1572 MobiDBLite consensus disorder prediction 510 661 - -
Phac4g00216 1572 MobiDBLite consensus disorder prediction 1551 1572 - -
Phac4g00216 1572 MobiDBLite consensus disorder prediction 902 922 - -
Phac4g00216 1572 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 305 414 IPR035441 -
Phac4g00216 1572 Pfam BAH domain 42 147 IPR001025 GO:0003682
Phac4g00216 1572 MobiDBLite consensus disorder prediction 403 487 - -
Phac4g00216 1572 MobiDBLite consensus disorder prediction 947 968 - -
Phac4g00216 1572 MobiDBLite consensus disorder prediction 1024 1051 - -
Phac4g00216 1572 MobiDBLite consensus disorder prediction 187 214 - -
Phac4g00216 1572 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 268 404 IPR035441 -
Phac4g00216 1572 MobiDBLite consensus disorder prediction 406 421 - -
Phac4g00216 1572 Pfam TFIIS helical bundle-like domain 351 400 IPR017923 -
Phac4g00216 1572 MobiDBLite consensus disorder prediction 579 595 - -
Phac4g00216 1572 MobiDBLite consensus disorder prediction 215 245 - -
Phac4g00216 1572 CDD TFIIS_I 325 401 - -
Phac4g00216 1572 MobiDBLite consensus disorder prediction 1494 1535 - -
Phac4g00216 1572 MobiDBLite consensus disorder prediction 1024 1094 - -
Phac4g00216 1572 MobiDBLite consensus disorder prediction 429 487 - -
Phac4g00216 1572 ProSiteProfiles TFIIS N-terminal domain profile. 317 403 IPR017923 -
Phac4g00216 1572 SMART TFS2_5 323 402 IPR003617 GO:0005634
Phac4g00216 1572 MobiDBLite consensus disorder prediction 510 566 - -
Phac4g00216 1572 Gene3D - 24 255 IPR043151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00216 Phac-Chr4 2980838 2988406 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Phac4g00216 BAH 3.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00216 - - gmx:112998769 2515.34