Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00214 ATGCATGGGTGTGGTGGTGACCAGTGGAAACACAATCGGCACATGTGGCCTGTACCTGCTAACGCGACCACTGATGGACGCAAGATTCGCGCTGGTGATTGTGCACTCTTCAAGCCACCTAGGGACTCCCCTCCTTTTATTGGAATAATTCGCAAGTTATCGTATGATAAACAAGAAAGTCCAAGTTTAGAAGTGCATTGGCTTTACCGACCTGCTGATTTGAAACTTGCTAAAGGAATTGTGCTGGAAGCTGCACCAAACGAAGTTTTTTACTCCTTTCACAAGGATGAAACACCTGCTGCATCATTACTCCATCCGTGTAAAGTCGCATTTCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCGCATTTGTCTGTCGACGAGTTTATGACATTGAGAACAACTGTTTATGGTGGCTAACTGATAAGGACTACCTTAATGAACAACAGGAAGAAGTTAACCAGTTATTAGATAAGACAAAACTAGAAATGCATGGGGCTGTGCAGTCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCAGCATCAACACAGTCATTGAAATCTGGTTCTGACAACATACAAAATAGTTCTTCCTTTGGTGCACAGGGTAAGGGTAAAAAGAGAGAGCGGGATCAGGGTTCGGATTCATCTAAAAAGGAGCGGTTATTTAAGATTGAAGATGGAGACTCTGGTCAGTTTAGACCGGAGAGCATGTTAAAGTCTGAGATTGCTAAAATAACTGATAAAGGTGGGCTTGTGGACTTTGAAGGAGTTGAAAAACTGGTACAGCTTATGCAGCCTGACAGCGCTGATAAAAAAATAGATTTACCTGGGCGGATAATGCTTGTCGATGTAATTGCACTTACAGACCGGTACGATTGTCTGGGTTGGTTTGTACAGCTCAGGGGTTTACCTGTGTTGGATGAATGGCTGCAGGAGGTCCATAAGGGCAAAATTGGTGATGGGAATATGCCCAAAGAAAGTGATAAGTCTGTTGATGAGTTTTTGTTAGCTTTACTGCGTGCATTGGATAAGCTTCCTGTGAACCTTCATGCACTGCAGACCTGTAATGTTGGAAAGTCTGTCAATCATTTACGCACCCACAAAAATGCTGAAATTCAGAGGAAAGCTAGGAGTTTAGTAGACACATGGAAGAGGCGTGTGGAAGCTGAAATGAACATGAATGATTCAAAGTCTGGTTCGAACCGTGCTGTTTCTTGGCCAGCAAAGCCAGCAAACTCCGAGTCTCCTCATGTTGGTAATAGGAAAACAGGGGGATCCTCTGATAACGTTGTGAAGAGCCCTGCTATTCAACCCTCATTATCTAAAAGTTCCCAATCTAAGTTAAGTTCCGGAGAAACTTTGTCCAAGTCTTCATCTCCTGGCTCTACTAAATCATTGACTACCTCAGTGGGCATGAACTCAAAAGATCAAAACAGTAAAGTCTTTGTTGGAGCTGCAACGGCAGATCTGCCTCTGACACCTATCAAAGAGGAGAGGAGCAGCAGTTCCAGTCAATCTCAAAATAACAGTATAACTTGTTCTAGTGAACATGCTAAAACTATTGGTTCTTGCAGGGAAGATGCGAAGAGCTCCACTGCAGTGTCAATGAGTGCGAGTAAAATTCATGGTTGTGCATCTCGAACTCGCAAGTCAAGCAATGGTATACACGGGGCTGGTGCAGTAGGTCAGAAGGAGCACAACTCTGCAAAAATTTCAACCAGAAATTCACCGACTGAGAAAGTATCACCAACTCGAGCATCCCATGAAAAATCAGTTGACCAGCCCCTTGCCGATCAAGGGAATAACCAGCGATTGATTCTCAGGTTGCCAAACACTGGTCGCAGTCCTTCAAGGGGAGCTAGCGGGGGCTCTTTTGAAGAACCAGCAACAACGAGCAGCAAAGCTTTGTCTCCTGCTGACCTGAATGATAATCAGGACAGAAGATTGAAAACTAAGACCGAGTGTTTGCTGACCCATGTGTCAAATATGATGAACGAGTCTTCTGATGCTAATGAAGCTTTGATTGGTGATGAAAATAAGGGCACTCCAATAGTTGATGAGCGATGCAGGGCAATTGAAGATAGCGACAAGGTATTAGAAACATCAAAACCAACTAGTTTGCCATCTGGATTTGTTTCCAGATCAGGGCAGACTTATGATGCTTCTTTAAGCCCCATGAATGCATTGGTTGAAAGCTGTGTAAAATTTTCTGAAGCAAGTTCATCCGTTTCCCATGGAGATGATGGGATGAACCTACTTGCTACTGTGGCTGCAGGGGAAATATCCAGATCGGAAAATGCATCACCTGTGGCATCCCCCGAGAGAAAGTCGTCTCCTGCAGCAGATGAACTGTGCTCTGGCAATGATTTAAAGTTAAAGCATTCTGGTGAAGCAGCTGTTCGCACTCTTTCAGAGTTGAATGGTAGGGCTACAGGAGAGCATCCTTTGAATACAGTTGATTCATCGCAGATAAAAAATGAATTGAGGCATCCTGCCATGACAGTGTCACGTGATTTTCAAGGGGATGGTGAAACCATTTCGTCTTCCCACGATACTCGTATAAATGTCTCCTCTACAGATTTGTTACAAAATGTTGAAGGTCCATGCTTACGGCCCGAAACCATAGAAGATGCTTCTGTAACTATACTGACTCCTAAAAAGGAGAGTAATGCAGACGCTGGAGTTTCAGACTCTAAACTAAAGCCAAGGGCCTCCTCTTTTGATGATGATCAGAAGGTTGATCACATGAATGAGGAGATCATTGAGAATGAGAAAATGTTGGTTTCAAAACCTTTTACAAATGTTGAGTCAGAAAACGAATCAGGTGAAAAGCAGCCTGATTTAACTTCAAGTGTGGATAATGAGAACCAGATTAGTGTGGAGAAAGCAACAGGTACAGGAATACTAGTGCAAAAGACCTCTCCAATTGCTGAAAACTGTGAGTCTATATATTTAAAAAAGGAGTTACCTGCTTCTGGTAATGCTTTAATGGTACCCATGGATGAAAATGCTGAGGACATGAAGTCAGTAGTGATTGAGCCTGACGAAAGACGAAGGGAGCAGGATTCTTCTTCTCCAGATGATTCTAATGATTGTGCTGAAGATAATATGGGCAGAAAAGAGGCCATTGGTCAGTGTTCTGGTTCATCATCAGTTCAGCCAGATTTACAAACAATGTCTAGGAAAGAGAATGAAGTGTCCAAATCATGTGAGCAAAAGCTAGATGCAAATCCGTCTGAAGTTTCAGGAGAGAGGCATGCATGCTCTGCAGCTGGTGCTGATGCAGCTGTAAAACTTGACTTTGATTTAAATGAAGGCTTTCCTTTTGATGACGCAGGCCAAGGGGAGATTGCCAGACAGGAAGATCCTATCACATCATCTGCAGTTCATGTTCCTTGCCCGTTGCCTTTTCCCATTTCGTCCATCTCTGGTGGCTTCCACCCTTCAATTACAGTGGCATCTGCTGCTAAAGGGCCGGTTATTCCACCAGAAAACCCATTGAGGATGAAGGGGGAGCTTGGATGGAAAGGATCTGCTGCTACCAGTGCATTTCGACCAGCTGAACCTAGGAAAAATGCTGAGATGCAGTCCTCTACTAATGATATTACTTCTGTTGAAGTCACTTCTATCAAACAAAGCCGTGCTCCCTTAGATTTTGACTTAAATGTGGCAGATGAAAGATGTTTTGAGGATGTTGGTTCACATGGTTCTTTAGAATCTGGACCACATGATCGTAGTGTGGGACTCGATCTTGATTTAAACAGAGTCGATGACACTCCTGAAATTGGTTCTTTCTCTATAAGCAAACTGGATATTCCTTCTTTACCAAGCAAGCCGTCACTGTCTAGTGGGTTGTCTAATGGTGGAAGTGTCTCAAGAGACTTTGACTTAAATAATGGGCTTGGCCTTGAAGAAGTTGGTAGTGAAGTCCCAGCACGTAGTCAGCTGATGAAAAACAGTGTACCGTTTCCAAGTGCTGTTCATAGCGCAAGAACAAACAATGCTGAATATGGGAATTATTCTGCATGGTTTCCTCCAGGAAATTCCTATCCTGCAATTACTGTCCCGCCACTTCTGCCTGGTAGAGGGGAGCAGAGTTATGTCAGTGGTGCTGGGGCACAAAGAATAATGGGTCCTACAGGTAGCAGTCCTTTCGGTCATGAAATATACAGGGGATCAGTTCTTTCATCCTCTCCGGCTGTTGCTTATCCATCCACTACAGCTTTTCCATATCCTGGATTTCCATTTGAAACCAATTTTCCATTATCCTCAAACTCCTTTTCTGGGTCAACTGCATTTATGGATTCCTCGAATGTGGGCGGGCTATGTTTTCCTACCATGACTTCACAGCCAGTTGGGCCTGGTGGTGTTGTTTCATCCACGTATCCCCGTCCATATGTTATGAGTCTTCCAGGTGGTACTAGTAATGTGATACCTGACAGCAGAAAATGGGGAAGTCAAAGTCTGGATCTTAATTCAGGCCCTGGTGTGGCAGATACAGAACGGAGGGATGATAGATTGCCTTCAGGATTGAGGCAAATGTCTGTCCCGAACACACAAGCCTCGATTGAGGACCACTTGAAGATGTTTCAGATGGCAGGAGCTGCATTGAAAAGAAAAGAGCCTGATGGTGGTTGGGATGCTGAGAGATTCGGTTATAAGCAACACTCACGGCAATAG 4689 0.4404 MHGCGGDQWKHNRHMWPVPANATTDGRKIRAGDCALFKPPRDSPPFIGIIRKLSYDKQESPSLEVHWLYRPADLKLAKGIVLEAAPNEVFYSFHKDETPAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIENNCLWWLTDKDYLNEQQEEVNQLLDKTKLEMHGAVQSGGRSPKPLNGPASTQSLKSGSDNIQNSSSFGAQGKGKKRERDQGSDSSKKERLFKIEDGDSGQFRPESMLKSEIAKITDKGGLVDFEGVEKLVQLMQPDSADKKIDLPGRIMLVDVIALTDRYDCLGWFVQLRGLPVLDEWLQEVHKGKIGDGNMPKESDKSVDEFLLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNAEIQRKARSLVDTWKRRVEAEMNMNDSKSGSNRAVSWPAKPANSESPHVGNRKTGGSSDNVVKSPAIQPSLSKSSQSKLSSGETLSKSSSPGSTKSLTTSVGMNSKDQNSKVFVGAATADLPLTPIKEERSSSSSQSQNNSITCSSEHAKTIGSCREDAKSSTAVSMSASKIHGCASRTRKSSNGIHGAGAVGQKEHNSAKISTRNSPTEKVSPTRASHEKSVDQPLADQGNNQRLILRLPNTGRSPSRGASGGSFEEPATTSSKALSPADLNDNQDRRLKTKTECLLTHVSNMMNESSDANEALIGDENKGTPIVDERCRAIEDSDKVLETSKPTSLPSGFVSRSGQTYDASLSPMNALVESCVKFSEASSSVSHGDDGMNLLATVAAGEISRSENASPVASPERKSSPAADELCSGNDLKLKHSGEAAVRTLSELNGRATGEHPLNTVDSSQIKNELRHPAMTVSRDFQGDGETISSSHDTRINVSSTDLLQNVEGPCLRPETIEDASVTILTPKKESNADAGVSDSKLKPRASSFDDDQKVDHMNEEIIENEKMLVSKPFTNVESENESGEKQPDLTSSVDNENQISVEKATGTGILVQKTSPIAENCESIYLKKELPASGNALMVPMDENAEDMKSVVIEPDERRREQDSSSPDDSNDCAEDNMGRKEAIGQCSGSSSVQPDLQTMSRKENEVSKSCEQKLDANPSEVSGERHACSAAGADAAVKLDFDLNEGFPFDDAGQGEIARQEDPITSSAVHVPCPLPFPISSISGGFHPSITVASAAKGPVIPPENPLRMKGELGWKGSAATSAFRPAEPRKNAEMQSSTNDITSVEVTSIKQSRAPLDFDLNVADERCFEDVGSHGSLESGPHDRSVGLDLDLNRVDDTPEIGSFSISKLDIPSLPSKPSLSSGLSNGGSVSRDFDLNNGLGLEEVGSEVPARSQLMKNSVPFPSAVHSARTNNAEYGNYSAWFPPGNSYPAITVPPLLPGRGEQSYVSGAGAQRIMGPTGSSPFGHEIYRGSVLSSSPAVAYPSTTAFPYPGFPFETNFPLSSNSFSGSTAFMDSSNVGGLCFPTMTSQPVGPGGVVSSTYPRPYVMSLPGGTSNVIPDSRKWGSQSLDLNSGPGVADTERRDDRLPSGLRQMSVPNTQASIEDHLKMFQMAGAALKRKEPDGGWDAERFGYKQHSRQ* 1563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00214 1562 MobiDBLite consensus disorder prediction 419 477 - -
Phac4g00214 1562 MobiDBLite consensus disorder prediction 1541 1562 - -
Phac4g00214 1562 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1562 - -
Phac4g00214 1562 MobiDBLite consensus disorder prediction 892 912 - -
Phac4g00214 1562 ProSiteProfiles BAH domain profile. 27 142 IPR001025 GO:0003682
Phac4g00214 1562 MobiDBLite consensus disorder prediction 937 958 - -
Phac4g00214 1562 SMART BAH_4 27 142 IPR001025 GO:0003682
Phac4g00214 1562 MobiDBLite consensus disorder prediction 500 556 - -
Phac4g00214 1562 MobiDBLite consensus disorder prediction 1014 1041 - -
Phac4g00214 1562 MobiDBLite consensus disorder prediction 1046 1063 - -
Phac4g00214 1562 MobiDBLite consensus disorder prediction 177 204 - -
Phac4g00214 1562 Pfam BAH domain 29 134 IPR001025 GO:0003682
Phac4g00214 1562 MobiDBLite consensus disorder prediction 1183 1203 - -
Phac4g00214 1562 Pfam TFIIS helical bundle-like domain 341 390 IPR017923 -
Phac4g00214 1562 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 295 404 IPR035441 -
Phac4g00214 1562 MobiDBLite consensus disorder prediction 1484 1525 - -
Phac4g00214 1562 MobiDBLite consensus disorder prediction 500 651 - -
Phac4g00214 1562 MobiDBLite consensus disorder prediction 597 643 - -
Phac4g00214 1562 MobiDBLite consensus disorder prediction 205 235 - -
Phac4g00214 1562 CDD TFIIS_I 315 391 - -
Phac4g00214 1562 MobiDBLite consensus disorder prediction 1014 1084 - -
Phac4g00214 1562 MobiDBLite consensus disorder prediction 393 477 - -
Phac4g00214 1562 SMART TFS2_5 313 392 IPR003617 GO:0005634
Phac4g00214 1562 MobiDBLite consensus disorder prediction 765 790 - -
Phac4g00214 1562 MobiDBLite consensus disorder prediction 1543 1562 - -
Phac4g00214 1562 MobiDBLite consensus disorder prediction 165 236 - -
Phac4g00214 1562 Gene3D - 20 242 IPR043151 -
Phac4g00214 1562 MobiDBLite consensus disorder prediction 396 411 - -
Phac4g00214 1562 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 258 394 IPR035441 -
Phac4g00214 1562 MobiDBLite consensus disorder prediction 569 585 - -
Phac4g00214 1562 ProSiteProfiles TFIIS N-terminal domain profile. 307 393 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00214 Phac-Chr4 2980838 2988406 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Phac4g00214 BAH 3.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00214 - - gmx:112998769 2493