Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00210 ATGTCGGAAGGGTTCGCGATCGAACTGTACTTGGATCCGGCGTTGGAGAATCAGGTGCTGAAGGCCTGGAACGTTCTCGCGCGCCGACAAATCACCACTCACCTCATCGAGATGGAGTCGCGCCCTCACATAACGCTCTTCTCCGCCCCCTTTCTAGAACCTTCCAAGCTCAAATCGCTTCTCAGAACCTTCGCATCCAAGCACGATCCTCTCTCTCTCTCCTTCTCCTCCGTCGGCACCTTCCCCAGCCACGCCGACAACCTCCTCTTCCTCGCGCCCACGCCCTCCCTCTCCCTCCTCGAATTCCAGTCGCACCTCTGCGACGCCATTAGCAAAGAAGGCTTTGAGATCTCCGACGATTTCGCCTTCAATTCCTGGATACCGTACTGCTCGGTCGCGCACCACGTCCCCAAAAACAGAATGCCCGAGGCTTTCTCCCTCTTGCGGGAACTCAAACTGCCTGTTTCCGGTTACGCTACGGACATCGCGCTTGTGCAGTTCTCTCCGGTTCGCGAACTCTTCTCCTTTGTGCTCGGCAACAATGTAGACTCTTGA 555 0.5658 MSEGFAIELYLDPALENQVLKAWNVLARRQITTHLIEMESRPHITLFSAPFLEPSKLKSLLRTFASKHDPLSLSFSSVGTFPSHADNLLFLAPTPSLSLLEFQSHLCDAISKEGFEISDDFAFNSWIPYCSVAHHVPKNRMPEAFSLLRELKLPVSGYATDIALVQFSPVRELFSFVLGNNVDS* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00210 184 Gene3D Cyclic phosphodiesterase 5 180 - -
Phac4g00210 184 Pfam 2'-5' RNA ligase superfamily 41 166 - -
Phac4g00210 184 SUPERFAMILY LigT-like 5 165 IPR009097 -
Phac4g00210 184 PANTHER - 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00210 Phac-Chr4 2970756 2971823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00210 1 184 Calmodulin-binding Proteins AT5G40190 61.957 4.51e-79 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00210 - - pvu:PHAVU_004G019100g 357.066