Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00209 ATGTCGGAAGGGTTCGCGATCGAACTGTACTTGGATCCGGCGTTGGAGAATCAGGTGCTGAAGGCCTGGAACGTTCTCGCGCGCCGACAAATCACCACTCACCTCATCGAGATGGAGTCGCGCCCCCACATAACGCTCTTCTCCGCCCCCTTTCTAGAACCTTCGAAACTCGAATCGCTTCTTAGAACCTTCGCATCCAAGCACGATCCTCTCTCTCTGTCCTTCTCCTCCGTCGGCACCTTCCCCAGCAACTCCGACAACCTCCTCTTCCTCGCGCCCACGCCCTCCCTCTCCCTCCTCCAATTCCAGTCGCACCTCTGCGACGCCATCAGAAAAGAAGGCCTTGAGGTCTCCGACGATTTCGCCTTCAATTCCTGGATACCTTACTGCTCGGTCGCGCACCACGTTCCCAAAAACAGAATGCCCGAGGCTTTCTCCCTCTTGCGGGAACTCAAACTGCCGGTCTCCGGTTACGCTACGGACATCGCGCTCGTGCAGTTCTCTCCGGTTCGTGAACTCTTCTCCTTTGTGCTCGGCAACAATGTAGACTCCTGA 555 0.5676 MSEGFAIELYLDPALENQVLKAWNVLARRQITTHLIEMESRPHITLFSAPFLEPSKLESLLRTFASKHDPLSLSFSSVGTFPSNSDNLLFLAPTPSLSLLQFQSHLCDAIRKEGLEVSDDFAFNSWIPYCSVAHHVPKNRMPEAFSLLRELKLPVSGYATDIALVQFSPVRELFSFVLGNNVDS* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00209 184 Pfam 2'-5' RNA ligase superfamily 41 166 - -
Phac4g00209 184 Gene3D Cyclic phosphodiesterase 5 180 - -
Phac4g00209 184 SUPERFAMILY LigT-like 5 165 IPR009097 -
Phac4g00209 184 PANTHER - 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00209 Phac-Chr4 2966521 2967826 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00209 1 184 Calmodulin-binding Proteins AT5G40190 62.500 1.62e-80 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00209 - - pvu:PHAVU_004G019100g 366.311