Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00195 ATGCAGGTTCTGAATGGTACCAGAAATCTGTGTGCAGGATCACAAAGAAAGGGAAAAAACTTCAACATTCAGAATCTTCATGCAAAGTTGATCATGGCTTCTAGAATTCTTTCCACTCTGCTTAATGTGTCTTGTTCTTCTTCTTCTTTTGTCACTAAACGTTGCATAGGCCTATCTTGTCTCTGGCATAGAAGTTTAAGTGAAACTGCTGCTTCTGCTGCTGCTGATATAGAGGCTAGCAAACCACCTGTGCAAATTGAATACAATCAGCTTCTGATTGATGGACTGTTTGTTGATGCAGCTTCTGGAAAAACTTTTCCAACCAATGATCCTAGGACTGGAGATACAATTGTCAATGTAGCCGAAGCAGACGTTGAAGATGTAAATCGTGCTGTACGTGCTGCTCGCAAGGCTTTTGATGAGGGACCATGGCCAAAGATGACAGCTTATGAAAGATCACGAATAATTTTGCGTTGTGCTGATATATTGGAGAAACACAATGATGAAGTTGCAGCAATTGAAACATGGGATAGTGGGAAGCCTTATGAACAGGCTGCAAATGTTGAAATACCTATGGTGGTACGGTTGTTCCGATATTATGCAGGTTGGGCGGATAAAATTCATGGTTTAACAGTTCCAGCTGATGGACCATACCATGTCCAAACCTTGCATGAACCCATTGGTGTAGCAGGGCAGATTGTACCTTGGAATTTCCCACTTCTTATTTTTTCATGGAAGGTTGCACCTGCATTAGCTTGTGGTTGTACAGTTGTAATTAAAACTGCAGAACAGACACCACTTTCTGCCCTTCATGTGTCAAAGCTATTTCATGAGGCAGGACTTCCTCCTGGAGTTCTGAATGTTATCAGTGGCTTTGGTCCTACTGCTGGAGCAGCTCTGTGTACTCATATGGATGTTGACAAGCTTGCTTTCACAGGATCCTCTGACACTGGCAGACGGGTACTAGAACTCTCAGCACGCAGTAACCTGAAGCCGGTAACTCTGGAGCTGGGTGGAAAATCTCCATTCATTGTCTGCAAGGAAGCTGATATTGATGCAGCTGTTGAGGCGGCACATTCTGCATTATTCTTTAATCAGGGGCAATGTTGTTGTGCTGGTTCTCGCACATTTGTTCATGAAAGCATATATGATGAATTTGTGGAAAAGACTAAAGCTCGTGCTATTAAACGTGTAGTTGGAGACCCTTTCAAAAGTGGGGTTGAGCAAGGTCCTCAGGTTGATTTTACACAATTCAAGAAGATCCTGAAATATATAAGATCAGGCATTGAAAGTGGTGCTACACTGGAATCTGGTGGTCAAAGAGTTGGCTCAAAAGGCTACTACATCGAACCAACTGTTTTCTCAAATGTTCAGGACGACATGTTGATAGCAAAAGATGAGATATTCGGTCCAGTACAATCTATCCTGAAATTCAAGTATGCTATTAATCACTAG 1455 0.4234 MQVLNGTRNLCAGSQRKGKNFNIQNLHAKLIMASRILSTLLNVSCSSSSFVTKRCIGLSCLWHRSLSETAASAAADIEASKPPVQIEYNQLLIDGLFVDAASGKTFPTNDPRTGDTIVNVAEADVEDVNRAVRAARKAFDEGPWPKMTAYERSRIILRCADILEKHNDEVAAIETWDSGKPYEQAANVEIPMVVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIVPWNFPLLIFSWKVAPALACGCTVVIKTAEQTPLSALHVSKLFHEAGLPPGVLNVISGFGPTAGAALCTHMDVDKLAFTGSSDTGRRVLELSARSNLKPVTLELGGKSPFIVCKEADIDAAVEAAHSALFFNQGQCCCAGSRTFVHESIYDEFVEKTKARAIKRVVGDPFKSGVEQGPQVDFTQFKKILKYIRSGIESGATLESGGQRVGSKGYYIEPTVFSNVQDDMLIAKDEIFGPVQSILKFKYAINH* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00195 484 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 363 374 IPR016160 GO:0016491
Phac4g00195 484 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 74 479 - -
Phac4g00195 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 93 338 IPR016162 GO:0016491
Phac4g00195 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 339 479 IPR016163 GO:0016620
Phac4g00195 484 FunFam Mitochondrial aldehyde dehydrogenase 2 341 483 - -
Phac4g00195 484 Pfam Aldehyde dehydrogenase family 97 479 IPR015590 GO:0016491
Phac4g00195 484 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 93 349 - -
Phac4g00195 484 SUPERFAMILY ALDH-like 86 479 IPR016161 GO:0016491
Phac4g00195 484 Coils Coil 118 138 - -
Phac4g00195 484 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 335 342 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00195 Phac-Chr4 2681321 2686809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00195 32 478 Aldehyde Dehydrogenase Gene Family AT3G48000 71.365 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00195 K00128 - gmx:100798892 770.385