Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00194 ATGCAGGTTCTGAATGGTACCAGAAATCTGTGTGCAGGATCACAAAGAAAGGGAAAAAACTTCAACATTCAGAATCTTCATGCAAAGTTGATCATGGCTTCTAGAATTCTTTCCACTCTGCTTAATGTGTCTTGTTCTTCTTCTTCTTTTGTCACTAAACGTTGCATAGGCCTATCTTGTCTCTGGCATAGAAGTTTAAGTGAAACTGCTGCTTCTGCTGCTGCTGATATAGAGGCTAGCAAACCACCTGTGCAAATTGAATACAATCAGCTTCTGATTGATGGACTGTTTGTTGATGCAGCTTCTGGAAAAACTTTTCCAACCAATGATCCTAGGACTGGAGATACAATTGTCAATGTAGCCGAAGCAGACGTTGAAGATGTAAATCGTGCTGTACGTGCTGCTCGCAAGGCTTTTGATGAGGGACCATGGCCAAAGATGACAGCTTATGAAAGATCACGAATAATTTTGCGTTGTGCTGATATATTGGAGAAACACAATGATGAAGTTGCAGCAATTGAAACATGGGATAGTGGGAAGCCTTATGAACAGGCTGCAAATGTTGAAATACCTATGGTGGTACGGTTGTTCCGATATTATGCAGGTTGGGCGGATAAAATTCATGGTTTAACAGTTCCAGCTGATGGACCATACCATGTCCAAACCTTGCATGAACCCATTGGTGTAGCAGGGCAGATTGTACCTTGGAATTTCCCACTTCTTATTTTTTCATGGAAGGTTGCACCTGCATTAGCTTGTGGTTGTACAGTTGTAATTAAAACTGCAGAACAGACACCACTTTCTGCCCTTCATGTGTCAAAGCTATTTCATGAGGCAGGACTTCCTCCTGGAGTTCTGAATGTTATCAGTGGCTTTGGTCCTACTGCTGGAGCAGCTCTGTGTACTCATATGGATGTTGACAAGCTTGCTTTCACAGGATCCTCTGACACTGGCAGACGGGTACTAGAACTCTCAGCACGCAGTAACCTGAAGCCGGTAACTCTGGAGCTGGGTGGAAAATCTCCATTCATTGTCTGCAAGGAAGCTGATATTGATGCAGCTGTTGAGGCGGCACATTCTGCATTATTCTTTAATCAGGGGCAATGTTGTTGTGCTGGTTCTCGCACATTTGTTCATGAAAGCATATATGATGAATTTGTGGAAAAGACTAAAGCTCGTGCTATTAAACGTGTAGTTGGAGACCCTTTCAAAAGTGGGGTTGAGCAAGGTCCTCAGGTTGATTTTACACAATTCAAGAAGATCCTGAAATATATAAGATCAGGCATTGAAAGTGGTGCTACACTGGAATCTGGTGGTCAAAGAGTTGGCTCAAAAGGCTACTACATCGAACCAACTGTTTTCTCAAATGTTCAGGACGACATGTTGATAGCAAAAGATGAGATATTCGGTCCAGTACAATCTATCCTGAAATTCAAGGATCTAGAGGAGGTGATAAGAAGGGCCAATGCAACTTCTTATGCCCTGGCTGCTGGAGTTTATACTCGGAATATAGACACTGCCAATACCTTGATGCGGGCATTGCGAGTTGGAACAGTATGGATCAACTGCTATGATATCTTTGATGCAGCAATACCTTTTGGTGGATATAAAATGAGTGGTCAAGGGAGAGTAAGGGGAATCTACAGCCTTAGAAGCTACCTTCAAGTTAAAGCTTGTGTCACTGCTTTGAAGAATCCTGCATGGCTCTAG 1710 0.4281 MQVLNGTRNLCAGSQRKGKNFNIQNLHAKLIMASRILSTLLNVSCSSSSFVTKRCIGLSCLWHRSLSETAASAAADIEASKPPVQIEYNQLLIDGLFVDAASGKTFPTNDPRTGDTIVNVAEADVEDVNRAVRAARKAFDEGPWPKMTAYERSRIILRCADILEKHNDEVAAIETWDSGKPYEQAANVEIPMVVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIVPWNFPLLIFSWKVAPALACGCTVVIKTAEQTPLSALHVSKLFHEAGLPPGVLNVISGFGPTAGAALCTHMDVDKLAFTGSSDTGRRVLELSARSNLKPVTLELGGKSPFIVCKEADIDAAVEAAHSALFFNQGQCCCAGSRTFVHESIYDEFVEKTKARAIKRVVGDPFKSGVEQGPQVDFTQFKKILKYIRSGIESGATLESGGQRVGSKGYYIEPTVFSNVQDDMLIAKDEIFGPVQSILKFKDLEEVIRRANATSYALAAGVYTRNIDTANTLMRALRVGTVWINCYDIFDAAIPFGGYKMSGQGRVRGIYSLRSYLQVKACVTALKNPAWL* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00194 569 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 363 374 IPR016160 GO:0016491
Phac4g00194 569 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 341 530 IPR016163 GO:0016620
Phac4g00194 569 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 74 558 - -
Phac4g00194 569 CDD ALDH_F2BC 86 561 - -
Phac4g00194 569 Pfam Aldehyde dehydrogenase family 97 558 IPR015590 GO:0016491
Phac4g00194 569 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 103 558 IPR016162 GO:0016491
Phac4g00194 569 FunFam Mitochondrial aldehyde dehydrogenase 2 341 530 - -
Phac4g00194 569 SUPERFAMILY ALDH-like 86 561 IPR016161 GO:0016491
Phac4g00194 569 Coils Coil 118 138 - -
Phac4g00194 569 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 335 342 IPR029510 GO:0016491
Phac4g00194 569 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 93 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00194 Phac-Chr4 2681321 2686809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00194 32 569 Aldehyde Dehydrogenase Gene Family AT3G48000 71.004 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00194 K00128 - gmx:100798892 937.562