Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00179 ATGTGCGCATGCTCCCAAAGTATAGTTAAGCTCCTTGACTGGGGGGAAGAGGGTCATCGATCAGATGCTGAAATAGCTTCTTTGAGAGCAGCGTTTACTCAAGAAGTTGCCGTTTGGCACAAGCTTGACCATCCTAATGTAACCAGGTTTCTTGGGGCAACAATGGGAACATCAGAGCTACAGATACAAACAGAAAATGGTCATATAGGCATGCCAAGTAATGTTTGTTGTGTTGTTGTTGAATATTGTCCTGGAGGTGCACTGAAGACTTATCTTATTAAAAACCGAAGAAGGAAGCTGGCTTTTAAAGTGGTTGTTCAACTGGCTCTTGACCTTGCAAGAGGGTTGAGCTATCTCCACACAAAGAAGATTGTCCACAGAGATGTTAAAACAGAAAATATGCTTCTGGACAAGACACGAACCTTGAAAATAGCTGATTTTGGAGTGGCTCGTATTGAGGCTTCCAATCCTCATGACATGACAGGTGAAACTGGAACCCTTGGTTACATGGCTCCTGAGGTTCTAAATGGTAATCCATACAATAGAAAGTGTGATGTGTACAGTTTCGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCATATCCGGACCTTAGCTTCTCCGAAGTGACGTCAGCTGTAGTACGGCAGAATCTGAGGCCAGAGATTCCACGATGTTGTCCTAGCTCTCTGGCAAATGTGATGAAAAGATGCTGGGATGCCAATCCTGATAAGAGGCCAGAGATGGATGAAGTAGTGTCCATGTTGGAAGCTATTGACACTTCAAAGGGTGGAGGTATGATCCCTGTTGATCAGCCTCAAGGTTGTTTATGTTTTCGCAGCTATCGAGGACCTTGA 861 0.4437 MCACSQSIVKLLDWGEEGHRSDAEIASLRAAFTQEVAVWHKLDHPNVTRFLGATMGTSELQIQTENGHIGMPSNVCCVVVEYCPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHTKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPVDQPQGCLCFRSYRGP* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00179 286 FunFam Serine/threonine-protein kinase HT1 83 268 - -
Phac4g00179 286 CDD STKc_MAP3K-like 9 257 - -
Phac4g00179 286 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 260 - -
Phac4g00179 286 Gene3D Transferase(Phosphotransferase) domain 1 5 264 - -
Phac4g00179 286 SMART serkin_6 1 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00179 286 PRINTS Tyrosine kinase catalytic domain signature 80 93 IPR001245 GO:0004672|GO:0006468
Phac4g00179 286 PRINTS Tyrosine kinase catalytic domain signature 228 250 IPR001245 GO:0004672|GO:0006468
Phac4g00179 286 PRINTS Tyrosine kinase catalytic domain signature 118 136 IPR001245 GO:0004672|GO:0006468
Phac4g00179 286 PRINTS Tyrosine kinase catalytic domain signature 184 206 IPR001245 GO:0004672|GO:0006468
Phac4g00179 286 ProSiteProfiles Protein kinase domain profile. 1 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00179 286 SUPERFAMILY Protein kinase-like (PK-like) 27 257 IPR011009 -
Phac4g00179 286 PIRSF ILK 18 266 - -
Phac4g00179 286 Pfam Protein tyrosine and serine/threonine kinase 28 257 IPR001245 GO:0004672|GO:0006468
Phac4g00179 286 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00179 Phac-Chr4 2377880 2384062 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00179 9 286 MAP Kinase Kinase Kinase AT3G22750 75.887 6.67e-167 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phac4g00179 PK_Tyr_Ser-Thr 8.9e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00179 - - gmx:100796762 570.466