Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00178 ATGAAGAAGAGTGAGAGTGGGGGGTATGTGAGAGCGGATCAGATAGATCTGAAGAGCTTGGATGAGCAGCTTCAGAGACATCTGAGTAGAGCATGGACTATGGAGAAGAACAAGGAGAAGGAGGAAGAGGAGGTTGAAGGAAGGTCCACAAGAAGCAGACAAGAGTGGGAGATTGACCCCTCTAAGCTTGTCATCAAGACTGTCATTGCCCGTGGCACTTTTGGCACAGTTCATCGTGGGATTTATGATGGACAAGATGTTGCAGTTAAGCTCCTTGACTGGGGGGAAGAGGGTCATCGATCAGATGCTGAAATAGCTTCTTTGAGAGCAGCGTTTACTCAAGAAGTTGCCGTTTGGCACAAGCTTGACCATCCTAATGTAACCAGGTTTCTTGGGGCAACAATGGGAACATCAGAGCTACAGATACAAACAGAAAATGGTCATATAGGCATGCCAAGTAATGTTTGTTGTGTTGTTGTTGAATATTGTCCTGGAGGTGCACTGAAGACTTATCTTATTAAAAACCGAAGAAGGAAGCTGGCTTTTAAAGTGGTTGTTCAACTGGCTCTTGACCTTGCAAGAGGGTTGAGCTATCTCCACACAAAGAAGATTGTCCACAGAGATGTTAAAACAGAAAATATGCTTCTGGACAAGACACGAACCTTGAAAATAGCTGATTTTGGAGTGGCTCGTATTGAGGCTTCCAATCCTCATGACATGACAGGTGAAACTGGAACCCTTGGTTACATGGCTCCTGAGGTTCTAAATGGTAATCCATACAATAGAAAGTGTGATGTGTACAGTTTCGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCATATCCGGACCTTAGCTTCTCCGAAGTGACGTCAGCTGTAGTACGGCAGGTACATGATGTGTATTAA 912 0.4463 MKKSESGGYVRADQIDLKSLDEQLQRHLSRAWTMEKNKEKEEEEVEGRSTRSRQEWEIDPSKLVIKTVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSDAEIASLRAAFTQEVAVWHKLDHPNVTRFLGATMGTSELQIQTENGHIGMPSNVCCVVVEYCPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHTKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQVHDVY* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00178 303 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 54 297 - -
Phac4g00178 303 PIRSF ILK 12 301 - -
Phac4g00178 303 CDD STKc_MAP3K-like 69 298 - -
Phac4g00178 303 SMART serkin_6 63 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00178 303 FunFam Kinase suppressor of Ras 1 52 147 - -
Phac4g00178 303 Gene3D Transferase(Phosphotransferase) domain 1 147 302 - -
Phac4g00178 303 MobiDBLite consensus disorder prediction 31 53 - -
Phac4g00178 303 Coils Coil 24 44 - -
Phac4g00178 303 Gene3D Phosphorylase Kinase; domain 1 51 146 - -
Phac4g00178 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Phac4g00178 303 Pfam Protein tyrosine and serine/threonine kinase 64 296 IPR001245 GO:0004672|GO:0006468
Phac4g00178 303 SUPERFAMILY Protein kinase-like (PK-like) 48 298 IPR011009 -
Phac4g00178 303 ProSiteProfiles Protein kinase domain profile. 63 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00178 Phac-Chr4 2377880 2384062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00178 2 299 MAP Kinase Kinase Kinase AT3G01490 76.901 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phac4g00178 PK_Tyr_Ser-Thr 8.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00178 - - gmx:100796762 584.719