Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00116 ATGGAGCATGTTTTGGAAAAAAGATTCCCTCTTAATGCAGAAGATTACAAGTTATATGAAGAAGTTGGTGAAGGCGTCAGTGCCTCTGTATACAGGGCTCTTTGTGTTCCTCTCAATGAGATAGTTGCAATCAAGGTTCTCGATCTAGAGAAGTGCAATAATGATCTGGATGGCATTCGAAGAGAGGTACAGACCATGAGCTTGATTGATCATCCAAATCTTTTACAGGCACATTGCTCTTTTACTGCTGGACACAATCTATGGGTTGTAATGCCATACATGGCAGGGGGTTCTTGCCTTCATATAATGAAGTCTGCCTATCCTGAGGGGTTTGAAGAGCCTGTTATTGCTACTTTATTGCATGAAGTTCTCAAAGCTCTTGTTTATCTTCATGCCCATGGTCACATACATAGAGATGTTAAGGCTGGGAATATTCTGTTAGATTCTAATGGTGCAGTCAAACTGGCTGACTTTGGAGTGTCAGCATGTATGTTTGATACTGGAGACAGGCAACGTTCAAGAAACACTTTTGTTGGAACACCTTGCTGGATGGCTCCTGAAGTCATGCAGCAATTACATGGATATGATTTTAAAGCAGATATATGGTCATTTGGTATAACAGCACTTGAACTTGCTCATGGTCATGCCCCGTTTTCCAAGTATCCACCTATGAAAGTTTTGCTTATGACTTTACAGAATGCCCCTCCAGGTCTTGATTATGAAAGAGATAAGAGATTTTCAAAGGCTTTCAAGGAGTTGGTTGCCACCTGCTTAGTAAAAGATCCAAAAAAGCGTCCTAGTTCAGAAAAGCTATTAAAGCACCACTTCTTTAGACATGCACGTGCTAGCAAATATCTATCTCGCACCATTCTAGAGGGCCTTGCTCCTTTAGGAGATCGTTTTAGAACGCTGAAGGCTAAAGAGGCAGATTTATTGGTGCAGAACAAGGCTCTTTATGAGGATAAGGATCAGTTATCTCAGAAAGAATATATTCGTGGAATCAGTGCCTGGAATTTTAACCTGGAAGATTTAAAAAGTCAAGCTGCTCTTATTCAAGATGATGACATACCTAATGAAGATGAGCCACAAAAGGATAAGAAGCAAAGAGACAGATCGGATGACTTCAGGGATCCTGCAGAGAGGTTAGCATCTGTAACAGCTAATCATTCAGATGGTGCACCCACTCAGAACAAGGAGGATGGATTCAATAATATTCAGGATTTGGAGGGATCGCTTGCTTCATTTCCTAGTAAACCTCTTCAAGCACTTAAAGGATGTTTTGATATGTGTGAGGATGACGTTAATAACAACAGTCCAAGAGATCTGGATCATGATTATGGAAATGAAAGTTCTGGGCCAAGTTCTTCATTACAACAAAACGCCAACAATCAGCAAAAAAGGTTTTTGAGTGGTTCTTTGCTACCTGATAATTTTCTTTTTCCCAAAAAGGTTGTTACTGATGGGGACAGGGATTACCTACAAACAAAGTATTCTTCGGAGAGGAATCACAGTGGTCCATTGCAATATCGACAGAAGAGAGATACCAACAACCTTCCATTGGTTGATGACACATCAGATGGAGCATTTGTCCAGCGTAGGGGGCGGTTTAAGGTCACATCGGCAGATCTCAGTCCAATGGGTCCTTCAAACAGTGCTTCTGGTCCAGTTGTTAGTCCTACCAGTCCACCAAATCAAAATTTCATGGCTGGCGCCATTCTTCCATCGCTGCAGTGCATCTTGCAACAGAATGGTTTGCAGAGGGAAGAGATTATAAAATTAATAAAGTATGCAGAGCAATCTTCTGGTAAGAATGTAGAATCAGTGGAGGCAGGGGGGGCAGTTGATAGTTTGCAGGTACCTGCAACAACCAGGGAGAGGGATCTGCATTTTCAGGTGATTCAACTCCAACAGAGCATTGGAAGCCTTGTTGAGGAATTACAAAGACAAAAGATGAAAAATGTTCAGTTAGAGAAGCAGTTGAGCAGTATGAATAACAAAGTGGAGAAGTGA 2010 0.4149 MEHVLEKRFPLNAEDYKLYEEVGEGVSASVYRALCVPLNEIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNLLQAHCSFTAGHNLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLHEVLKALVYLHAHGHIHRDVKAGNILLDSNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKAFKELVATCLVKDPKKRPSSEKLLKHHFFRHARASKYLSRTILEGLAPLGDRFRTLKAKEADLLVQNKALYEDKDQLSQKEYIRGISAWNFNLEDLKSQAALIQDDDIPNEDEPQKDKKQRDRSDDFRDPAERLASVTANHSDGAPTQNKEDGFNNIQDLEGSLASFPSKPLQALKGCFDMCEDDVNNNSPRDLDHDYGNESSGPSSSLQQNANNQQKRFLSGSLLPDNFLFPKKVVTDGDRDYLQTKYSSERNHSGPLQYRQKRDTNNLPLVDDTSDGAFVQRRGRFKVTSADLSPMGPSNSASGPVVSPTSPPNQNFMAGAILPSLQCILQQNGLQREEIIKLIKYAEQSSGKNVESVEAGGAVDSLQVPATTRERDLHFQVIQLQQSIGSLVEELQRQKMKNVQLEKQLSSMNNKVEK* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00116 669 MobiDBLite consensus disorder prediction 495 526 - -
Phac4g00116 669 MobiDBLite consensus disorder prediction 437 463 - -
Phac4g00116 669 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00116 669 MobiDBLite consensus disorder prediction 448 463 - -
Phac4g00116 669 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00116 669 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 7 650 IPR047173 GO:0043539
Phac4g00116 669 Coils Coil 639 669 - -
Phac4g00116 669 MobiDBLite consensus disorder prediction 388 403 - -
Phac4g00116 669 MobiDBLite consensus disorder prediction 498 522 - -
Phac4g00116 669 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Phac4g00116 669 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Phac4g00116 669 Gene3D Transferase(Phosphotransferase) domain 1 97 320 - -
Phac4g00116 669 MobiDBLite consensus disorder prediction 543 560 - -
Phac4g00116 669 SUPERFAMILY Protein kinase-like (PK-like) 13 278 IPR011009 -
Phac4g00116 669 MobiDBLite consensus disorder prediction 350 403 - -
Phac4g00116 669 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Phac4g00116 669 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g00116 669 MobiDBLite consensus disorder prediction 539 560 - -
Phac4g00116 669 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Phac4g00116 669 CDD STKc_OSR1_SPAK 14 277 - -
Phac4g00116 669 MobiDBLite consensus disorder prediction 357 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00116 Phac-Chr4 1925536 1938518 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00116 1 666 MAP Kinase Kinase Kinase Kinase AT5G14720 65.988 0.0 910
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Phac4g00116 Pkinase 1.5e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00116 K08835 - gmx:100784402 1209.13