Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00110 ATGATTTCCACGTCTTCTTCTTCTTCTTCTTCTCTTCTTCTTATTATTTCCCTTTCTTTCTCTCTCTCTTATGTTCATATGTACAAAATAATGGACAAAAAACCATGCAACTCATCATCTCATGATCCTGAAGTGAGAAAGGGACCATGGACCATGGAAGAAGACTTGATCTTGATCAACTATATTGCCAACCATGGTGAAGGTGTTTGGAACTCTCTAGCAAAAGCTTCTGGTCTTAAACGAACTGGGAAAAGTTGTCGACTTCGTTGGCTAAACTATCTTCGTCCTGATGTTAGAAGAGGGAATATTACAACTGAAGAACAGCTTTTGATCTTTGAGCTTCATGCAAAGTGGGGTAATAGGTGGTCCAAAATTGCAAAGCATCTTCCTGGAAGAACTGACAATGAGATTAAGAACTTTTGGAGAACCAGGATTCAGAAACACATGAAGCAAGCTGAGAATTCACAACAACAGGGTAATAATAGTAATATTTCAGAGACAAATGATCATCATCATCATCATCATCATCATCATCATCAAGCAAGCTCTAGCACAAGCCTAGTATCCAACATGGCACTGCAAATTGAGACTTACTCTGCACCCTCATATCAAGAAAATTTGGAGTCATTTCCAACACAGTTCCCTACAATCACTGATCAATCAAGTTCTTGTACCAATCACAACATCAACAGCAACAATAACTATTGGAACATAGAGGACTTCTGGCCCATGCAATTGCTCAATGGGGATTGA 753 0.3891 MISTSSSSSSSLLLIISLSFSLSYVHMYKIMDKKPCNSSSHDPEVRKGPWTMEEDLILINYIANHGEGVWNSLAKASGLKRTGKSCRLRWLNYLRPDVRRGNITTEEQLLIFELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKHMKQAENSQQQGNNSNISETNDHHHHHHHHHHQASSSTSLVSNMALQIETYSAPSYQENLESFPTQFPTITDQSSSCTNHNINSNNNYWNIEDFWPMQLLNGD* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00110 250 FunFam Myb transcription factor 47 99 - -
Phac4g00110 250 Gene3D - 102 182 - -
Phac4g00110 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 94 IPR017930 -
Phac4g00110 250 MobiDBLite consensus disorder prediction 148 186 - -
Phac4g00110 250 CDD SANT 104 143 IPR001005 -
Phac4g00110 250 ProSiteProfiles Myb-like domain profile. 42 94 IPR001005 -
Phac4g00110 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 149 IPR017930 -
Phac4g00110 250 Pfam Myb-like DNA-binding domain 100 143 IPR001005 -
Phac4g00110 250 Pfam Myb-like DNA-binding domain 47 94 IPR001005 -
Phac4g00110 250 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 42 218 IPR044676 GO:0003700|GO:0006355|GO:0043565
Phac4g00110 250 FunFam Myb-related protein 305 104 186 - -
Phac4g00110 250 SUPERFAMILY Homeodomain-like 44 141 IPR009057 -
Phac4g00110 250 MobiDBLite consensus disorder prediction 150 165 - -
Phac4g00110 250 ProSiteProfiles Myb-like domain profile. 95 145 IPR001005 -
Phac4g00110 250 Gene3D - 47 99 - -
Phac4g00110 250 SMART sant 99 147 IPR001005 -
Phac4g00110 250 SMART sant 46 96 IPR001005 -
Phac4g00110 250 CDD SANT 49 94 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00110 Phac-Chr4 1644983 1649271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00110 45 250 MYB Transcription Factor Family AT3G01530 60.194 8.33e-82 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac4g00110 Myb_DNA-binding 2.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00110 K09422 - gmx:100305972 341.658