Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00101 ATGTTCCACCAAACCAAAACCTTCCACCTTTTTCATTTCCACCCCATGAACATGGCTACTTGCATCCCTACCTCTACCATGGAGGGTCATTCCAACCCTACCACCCCTCTTGGGATATCCACCCCTTGTGGTGGAGGATCTCCCCTCATAGGCTCCATTCACCATCCTTTGACTTTGGAACCAAACAAAACAATGGTGGATGCTTTGCATGGCTACCAAATATGTGAATTTTCACAAAATACCATATTGCTTCTACCTGCTCTAGCTTCATTTTCCATATCATCACCATTTCCATTTTCACTCTTTAATAAGTGTGAATTAATGGTGAGTGAATGTCTTTGGGACATTAATCAAAAAATGAAGGAAAAAAATGGTACCAAAATCAAAGGGCAATATTGGACTCCTGAAGAAGATAGGGTTCTTGTGGAAATGGTGAATCAATTGGGGCCTACCAAATGGTCACAAATTGCAAGGGCACTACAGGGCAGAATTGGGAAGCAATGTCGAGAAAGATGGAACAACCATCTTCGACCAAACATTAAGAGGGGAACATGGAGCTTGGAGGAAGACATGATTCTGATCAAAGGGCACCAAGAATTTGGAAACAAATGGTCAAAGATTGCAAAGAAATTGGATGGTAGGACTGAGAATGCTGTGAAGAACCACTGGAATGCCACCATGCGACGCCAAAACTGCAAGAAGAACAACCATGGTGACTACAAAGGCTCAATGCTCCATGCCTATGTCAAATGGGTCATTGCATCATCTCAAGAATCTGCAAAAAAAGTTCCCAAAAAATCCTCAGACAACATGATGAAGAAGAAGAAGAAGAAGGATGTGGAGGGATGCAATTGTGATGAGCTAGCTTTTTTCTTGAGCTAG 882 0.4229 MFHQTKTFHLFHFHPMNMATCIPTSTMEGHSNPTTPLGISTPCGGGSPLIGSIHHPLTLEPNKTMVDALHGYQICEFSQNTILLLPALASFSISSPFPFSLFNKCELMVSECLWDINQKMKEKNGTKIKGQYWTPEEDRVLVEMVNQLGPTKWSQIARALQGRIGKQCRERWNNHLRPNIKRGTWSLEEDMILIKGHQEFGNKWSKIAKKLDGRTENAVKNHWNATMRRQNCKKNNHGDYKGSMLHAYVKWVIASSQESAKKVPKKSSDNMMKKKKKKDVEGCNCDELAFFLS* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00101 293 Gene3D - 120 181 - -
Phac4g00101 293 SMART sant 129 178 IPR001005 -
Phac4g00101 293 SMART sant 181 229 IPR001005 -
Phac4g00101 293 PANTHER MYB PROTEIN-RELATED 130 270 - -
Phac4g00101 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 125 180 IPR017930 -
Phac4g00101 293 SUPERFAMILY Homeodomain-like 128 223 IPR009057 -
Phac4g00101 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 181 231 IPR017930 -
Phac4g00101 293 FunFam Transcriptional activator Myb isoform A 128 181 - -
Phac4g00101 293 ProSiteProfiles Myb-like domain profile. 177 227 IPR001005 -
Phac4g00101 293 CDD SANT 184 224 IPR001005 -
Phac4g00101 293 Gene3D - 184 246 - -
Phac4g00101 293 ProSiteProfiles Myb-like domain profile. 125 176 IPR001005 -
Phac4g00101 293 Pfam Myb-like DNA-binding domain 133 190 - -
Phac4g00101 293 CDD SANT 133 176 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00101 Phac-Chr4 1574698 1577370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00101 123 250 MYB Transcription Factor Family AT4G18770 60.465 3.97e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac4g00101 Myb_DNA-bind_6 2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00101 K09422 - vra:111242362 314.694