Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00083 ATGATGATGGGAAAGATCAAAATTACACTAGCATTTTGTTTGTTAACCATATTTTTTGGTTTGCAATTGAAGTGTGTTAAGGGTATTCCTTTCTTTCCTTCCAATGTAACAGTTAGTATAACCAATCGCTTAGAAGAGAGATATTTGGCTGTTCAGTGTAAAGACAAACACAATGATCTTGGGGTGCAACAACTAAATGTTGGCCAAACATTTAGTTTTTCGTTCCTTCCGGATATTTTTTTCCCTGAAACCTTGTACTTTTGTCATTTTGTATGGTTGGAAGGAGATCATTATTTTGACATATACGTCGAAAAGCGAGATACATACTGTAAAGGAGTTTCATGTTCTTGGGACATATTTGCGAATGGACCATGCAGAATGATATCGGGACATCGACAGTGCTTTGGTTGGAATCCACCTGCCGTAGAAGAAAGATTGCCTCTGCAACAAAGTAATGACACTTTATATGTATAA 474 0.365 MMMGKIKITLAFCLLTIFFGLQLKCVKGIPFFPSNVTVSITNRLEERYLAVQCKDKHNDLGVQQLNVGQTFSFSFLPDIFFPETLYFCHFVWLEGDHYFDIYVEKRDTYCKGVSCSWDIFANGPCRMISGHRQCFGWNPPAVEERLPLQQSNDTLYV* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00083 157 Pfam Plant self-incompatibility protein S1 37 129 IPR010264 -
Phac4g00083 157 PANTHER - 31 126 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00083 Phac-Chr4 1357786 1358329 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00083 36 142 Carbohydrate Esterase AT3G16970 36.207 1.54e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00083 - - pvu:PHAVU_004G010300g 274.633