Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00058 ATGGCAAAAGAGGTTGTTGAAAGCCTTTGGAATGGTGGTGAAGAATCTCAAATTCAAGCAGCTTTGGAGCTTTGTAGATTAAGCAGTAGGCAGAGGCAAAAGTTGGAGGAAAGTAGAGTCATGGTTCCTCTTGTTTCCATGCTTCATTCTGAAAACTATGAAGCAATAGAAGCTGCTCTCTGTGCTTTGCTCAGTCTTTCCTTTGGCTGTGAGAGAAACAAGATTCGGATCATCAAATCTGGAGCTTTGCCAGTTCTGCTGAGTCTCCTCCATGGTGATAGCCAGAGAGTGGCACATTTGACTTTGGCAGCCATGCTAACTCTCTCCTCTTGCAAAGCAAATAAGGTAGCAATTGCTTCTTCTGGGGCTGTTCAACTCTTGGCTGAGTTTGTGAACAGCAGTTGTAGCACTCAGTCTCAGCTTGATGCTATTGCTACTCTACACAATCTTGCAACCTGCCAAGAGATTGTTCCATTGATTGTCTCATCTGGGGTCATGCTCTCTTTGCTTGAACTGATCCACACCTCAGTAAAATCATCTCCATTGGTTGAGAAAGCAATTGGGTTGCTAGAAAACCTCATGTCTTCATCAGAGAGTGCACTATGTGAGGCTGCTAGCACCATGGGAGCAATCAGGATACTGGTTGAGACTGTTGAAGATGGTTCTTCACTGAGCAAAGAGCATGCAGTGTGCATACTTCTCCTTGTATGCCAGAGCTGCAGAGAGAAGTATAGAGGGTTGATTTTGACAGAGGGAGTGATGCCAGGGTTGCTTCAGTTAAGTGTGGATGGAACTTGGAGAGCCAAATCCATGGCTAGAGAACTGTTGTTGCTTCTGAGGGACTGCTCCAATTATAGCTCAAGATGTAAACAGATTAATCATGAGCTGATAGAAAGGATAATGGATGAAATTGAAGCAGAAGGAGAGACATTTGCAGATACTACTTTGAGGCTAGTAGAGGAGATGATTGCAAAGCTCCATGCTTAG 987 0.4428 MAKEVVESLWNGGEESQIQAALELCRLSSRQRQKLEESRVMVPLVSMLHSENYEAIEAALCALLSLSFGCERNKIRIIKSGALPVLLSLLHGDSQRVAHLTLAAMLTLSSCKANKVAIASSGAVQLLAEFVNSSCSTQSQLDAIATLHNLATCQEIVPLIVSSGVMLSLLELIHTSVKSSPLVEKAIGLLENLMSSSESALCEAASTMGAIRILVETVEDGSSLSKEHAVCILLLVCQSCREKYRGLILTEGVMPGLLQLSVDGTWRAKSMARELLLLLRDCSNYSSRCKQINHELIERIMDEIEAEGETFADTTLRLVEEMIAKLHA* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00058 328 PANTHER U BOX DOMAIN-CONTAINING 4 282 - -
Phac4g00058 328 FunFam U-box domain-containing protein 4 3 197 - -
Phac4g00058 328 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 164 199 IPR000225 GO:0005515
Phac4g00058 328 SMART arm_5 28 68 IPR000225 GO:0005515
Phac4g00058 328 SMART arm_5 70 110 IPR000225 GO:0005515
Phac4g00058 328 SMART arm_5 153 195 IPR000225 GO:0005515
Phac4g00058 328 SMART arm_5 111 152 IPR000225 GO:0005515
Phac4g00058 328 Gene3D - 2 327 IPR011989 -
Phac4g00058 328 FunFam U-box domain-containing protein 4 201 317 - -
Phac4g00058 328 SUPERFAMILY ARM repeat 4 304 IPR016024 -
Phac4g00058 328 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00058 Phac-Chr4 1086777 1088782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00058 4 281 U-box Gene Family AT3G54790 32.979 4.74e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00058 - - gmx:100778534 524.242