Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00046 ATGGCTAGGAGCTGGCTTAATGACATTGGAGGATTTGCAACGAAAGTGAAAAATACTACTCTGTCAGCTGCTGATCAAATGAAGAACTGTGAAACATATCGTGAATGTCCCAAATGTCATTATCACTCTAATAACAGTGATGTTTCTCATGAGTGGCCTGGCTTTCCTGTTGGTGTGAAGTTTGATCCTTCTGATATTGAGCTTTTAAAGCATTTGGAAGCAAAGTGTTGTGTTGGAAACAGAGAGCAGCACGCGTTTATTCATGAGTTCATCCCAACTTTAGAAGGGGAGCAAGGTATTTGCTACACTCATCCAGAAAATCTTCCAGGTGCTAGGAAAGATGGGAATAGTGTCCATTTCTTTCACAAAACAGCTAATGCATATGCTACTGGGAGAAGGAAACGTAGGAAGATTCATCATCAAGATGGTTTGACTGAGGAGCATGTTCGTTGGCACAAGACTGGTAGGACCAAATCTGTGACAGAAGATGGAGTTCATAAGGGCTTTAAGAAGATCATGGTCCTTTATATAAGGTCTAAGGAAGGGTCCAAGCCATATAAAACCAATTGGGTGATGCATCAGTTCCATCTAGGGAGTGAAGAAGAGGAGAAGGATGGTGAATATGTGGTTTCAAAAGTATTTTATCAGCACCAGAAGCACACTGAGAAGAATGAGGAGAATACAGTAGTTGAAGATTCTAACATAGCAGCACAAGCAGGTCCAAGTACCCCAAACCCAAATCCCCCAACTCGACCTTGCACAGGCAAATGTGATGACCATTTTGATGAAAATGAGCTTCTGTCATTCATCCAGGATGCCAAGCCTATACCTGTGGAATCACTTGCCCCACCATCTGATGTTCAGCATGAGGATATTAAGGTTGACCCTGCATGGTTGGCTGGTGAATCACAGCCTGATTGTGACTTTCATGAGTTGGAGGAAATATTGTTAATGTCAGATTCATCTGCTCTTTTTAATCATTCTGGATTGGCCTCCACTTTTAATGGCACTGCAAACAATTTGGTTGCACCAGGAAACACCAATGATTATGCATCTTCTGGAGTTTCTCTCCTGGACACCCTGGAATTGGAATCTCCTCCAGATTTTGATCTTTCTAATTTGCAATTTGGCTCTCAAGACAGCACCCTTCAGTGGATGGACAAGCTATAA 1170 0.4222 MARSWLNDIGGFATKVKNTTLSAADQMKNCETYRECPKCHYHSNNSDVSHEWPGFPVGVKFDPSDIELLKHLEAKCCVGNREQHAFIHEFIPTLEGEQGICYTHPENLPGARKDGNSVHFFHKTANAYATGRRKRRKIHHQDGLTEEHVRWHKTGRTKSVTEDGVHKGFKKIMVLYIRSKEGSKPYKTNWVMHQFHLGSEEEEKDGEYVVSKVFYQHQKHTEKNEENTVVEDSNIAAQAGPSTPNPNPPTRPCTGKCDDHFDENELLSFIQDAKPIPVESLAPPSDVQHEDIKVDPAWLAGESQPDCDFHELEEILLMSDSSALFNHSGLASTFNGTANNLVAPGNTNDYASSGVSLLDTLELESPPDFDLSNLQFGSQDSTLQWMDKL* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00046 389 ProSiteProfiles NAC domain profile. 55 216 IPR003441 GO:0003677|GO:0006355
Phac4g00046 389 MobiDBLite consensus disorder prediction 236 257 - -
Phac4g00046 389 Pfam No apical meristem (NAM) protein 56 197 IPR003441 GO:0003677|GO:0006355
Phac4g00046 389 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 271 IPR044799 GO:0003700
Phac4g00046 389 FunFam NAC domain-containing protein 8 64 220 - -
Phac4g00046 389 SUPERFAMILY NAC domain 40 216 IPR036093 GO:0003677|GO:0006355
Phac4g00046 389 Gene3D NAC domain 64 221 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00046 Phac-Chr4 699797 704023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00046 15 218 NAC Transcription Factor Family AT1G28470 51.339 2.14e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac4g00046 NAM 2.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00046 - - pvu:PHAVU_004G004900g 746.117