Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00039 ATGGTGTCAGTACTTTATCTGCTGCTAACCATGGTTCTTGGCATGCAAGTGAAAGACAGCAATGGTGGAGTGGTGGCTTCTGAAGCAAAAGATGGACTTTTTCCATCGAAAGTAGCCATTGAAATGACGAATTTCATGCTGGAGCAGCACTTGGTTGTTCACTGCAAGGACAAGCACCATGATCTTGGGGCTCAGACAATCAACAGTGGTGAAACATACAGTTTTGTTGTTACTCCTAATGCCTTTGCAAAGGTAACATTGTACTTCTGCAAGTTTTATTTTGCAGGTTCCAGTTACTATTTTGATATTTATAAACAAGACCGAGATGATTGTCCTGGTCATGTTTGTTACTGGGGCATATTCGAGCATGGACCTTGTAAGCTTAATCTCAGATCTCGTCAATGCTTCAGCTGGAATGGCGAATGA 426 0.4202 MVSVLYLLLTMVLGMQVKDSNGGVVASEAKDGLFPSKVAIEMTNFMLEQHLVVHCKDKHHDLGAQTINSGETYSFVVTPNAFAKVTLYFCKFYFAGSSYYFDIYKQDRDDCPGHVCYWGIFEHGPCKLNLRSRQCFSWNGE* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00039 141 Pfam Plant self-incompatibility protein S1 43 138 IPR010264 -
Phac4g00039 141 PANTHER - 34 131 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00039 Phac-Chr4 684498 684986 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00039 51 141 Carbohydrate Esterase AT3G16970 39.796 5.13e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00039 - - pvu:PHAVU_004G004500g 245.743