Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00034 ATGATGGTTTTAATGTCTGAAATGAGAGCAATAGTTTGTTTGCTCTTAGTAATATTTGTTGGTGTGCAATTCGAGTGTGGTGAGAGTCAGGGTACTCCTTTTCTTCCAACTAAAGTGACTGTTGAAATAACTAATCGCATAGAAGAAAGATATTTGGCTCTTCGATGCAAAGATAAACACCATGATCTAGGGTTGCAGCAACTCAATGTTGGTCAAACATATAGTTTCAGGTTTTATCCTAACTATTTTGTTAATGCGACCTTGTACTTTTGTCATTTTGTATGGTCGGGAGGAGATCATCATTTTGACATATATGTCGAACAAAGAGATGAATATGGTCACCACAATAGATGTTCTTGGGATATATATGCGACTGGACCATGTAAATACAACCCAGGACCTCAACAGTGCTTTAAATGGAATGCACCTGCTGCAAGAAAAAGATTACTTCTCGAAAAAAGTAATAATACTTTATCTATGTAA 483 0.3602 MMVLMSEMRAIVCLLLVIFVGVQFECGESQGTPFLPTKVTVEITNRIEERYLALRCKDKHHDLGLQQLNVGQTYSFRFYPNYFVNATLYFCHFVWSGGDHHFDIYVEQRDEYGHHNRCSWDIYATGPCKYNPGPQQCFKWNAPAARKRLLLEKSNNTLSM* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00034 160 PANTHER - 35 133 IPR010264 -
Phac4g00034 160 Pfam Plant self-incompatibility protein S1 40 140 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00034 Phac-Chr4 656469 657050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00034 20 142 Carbohydrate Esterase AT3G16970 38.406 1.37e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00034 - - pvu:PHAVU_004G003100g 298.13