Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00033 ATGATGGTTTTAATGTCTAAGATTAGAGCAATGTTTTGTTTGTCGTTAATAATACTTCTTGGTGTGCAATTGAAGTGTGGTAGTGGTGTTCCTCTTATCCCTCATAAACAGACCGTTCAAATAACTAATCGCTTAGTAGATAGATATTTGGGTATTCAATGCAAAGACAAAAAGCATGATCTAGGGGTGCATCAAATCAATGTTGGTGAACAATATAGTTTTAAGTTTTATCCTAACTACTTTTTAGATATTACTTTGTACTATTGTCATTTTGTATGGTTGGAAGGAGATCATTATTTCGACATATACGACGAAGTCAGAGATGATTATTGCGATAAGAACTTATGTGCTTGGGAAATACTTGCAACAGGACCATGTAAACTCGAATTCGGAGATCGAAAGTGCTTCAAATGGAATCCACCGGCTGCCCCACAAAGATTGCTTCTTGAAGAAAGTAATAATACTTTATCTATGTAA 477 0.348 MMVLMSKIRAMFCLSLIILLGVQLKCGSGVPLIPHKQTVQITNRLVDRYLGIQCKDKKHDLGVHQINVGEQYSFKFYPNYFLDITLYYCHFVWLEGDHYFDIYDEVRDDYCDKNLCAWEILATGPCKLEFGDRKCFKWNPPAAPQRLLLEESNNTLSM* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00033 158 PANTHER - 33 129 IPR010264 -
Phac4g00033 158 Pfam Plant self-incompatibility protein S1 38 138 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00033 Phac-Chr4 650335 650875 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00033 13 139 Carbohydrate Esterase AT3G16970 33.571 2.34e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00033 - - pvu:PHAVU_004G003100g 231.491