Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00025 ATGGACTCACCACAAACCACCGCCAAGCTCCGTCTCATGTGCAGCCACGGCGGCCACATACTCCCCCGTCCCGGCACCCGCTCCCTCTTCTACGCCGGCGGCGACACCCGCATCCTCTCCATCCACCGCCACACCCTCGCCACGCTCTCCTCCTTCCACTCCCACCTCTCCACACTCCTCTCTCTCAAATACCCCTTCACTCTCAAGTACCAGCTCCCCCACCTCCCCCTCCACTCCCTCATCTCCCTCTCCTCCGACCAAGACCTCCACACCCTCGTCGACCACCACCACCGCTCCTCTTCCCGCATCAGACTCTTCGTCTTCCCCACTTTCACCCCTCTTCTTCCTCCACATTCTCTTCCAAGTGATACCACTGTTTCCAGCACCATGTTGCACCGGCAGAATATATGTTACCAGGACCCTCTGCTTTCTGCTTCGGAGGCAAAACTCAATGCCAAGACTGTTCAATTCGAGAGGCCAAATTTTCAGTTTGTGCAATCTGCTACACCCCTTTTACCTCTTCCTGCTCCCCTAAACTCATCACCATCTTCCCACCATGTTTACCACCCACCTCCTCCTTCAAACCATCTGCTTTATCAAACCAATCTATACCTTGTGCCTGTTACTTTGCCTGTCACTGCCTCTACCCAAGCATCCATGAAACTAGATGTTTCATCTGCAAATTCCCATGTACCACGTAGCTATAACTCTCAGAACCACTCAACACACCCCGAAACTGCAGCATTTGTTCACGTCCCTTGCAACCAAAACCAGGAACCACAAACCCATCAATCTCAATCTCAGAATATATCTATGGAATCTCCCGAGAGTGGAAATGGACTTGACAAGAACCTTACTCGTGATCAGATATACAAATCTCAGCCCCCACCTCCGGCATTGCCTTCTTAA 909 0.5237 MDSPQTTAKLRLMCSHGGHILPRPGTRSLFYAGGDTRILSIHRHTLATLSSFHSHLSTLLSLKYPFTLKYQLPHLPLHSLISLSSDQDLHTLVDHHHRSSSRIRLFVFPTFTPLLPPHSLPSDTTVSSTMLHRQNICYQDPLLSASEAKLNAKTVQFERPNFQFVQSATPLLPLPAPLNSSPSSHHVYHPPPPSNHLLYQTNLYLVPVTLPVTASTQASMKLDVSSANSHVPRSYNSQNHSTHPETAAFVHVPCNQNQEPQTHQSQSQNISMESPESGNGLDKNLTRDQIYKSQPPPPALPS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00025 302 MobiDBLite consensus disorder prediction 257 302 - -
Phac4g00025 302 MobiDBLite consensus disorder prediction 257 291 - -
Phac4g00025 302 CDD PB1_UP2 13 108 - -
Phac4g00025 302 PANTHER OS05G0427100 PROTEIN-RELATED 8 272 - -
Phac4g00025 302 SMART PB1_new 24 110 IPR000270 GO:0005515
Phac4g00025 302 SUPERFAMILY CAD & PB1 domains 27 109 - -
Phac4g00025 302 Pfam PB1 domain 31 109 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00025 Phac-Chr4 616896 619013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g00025 3 108 MAP Kinase Kinase Kinase AT1G79570 36.607 5.45e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00025 - - pvu:PHAVU_004G002000g 473.011