Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04605 ATGATCAGAATTGTTCTTATTAGAGAAGAGGGGATAGATGTTAGAAAGATGATGGAGCATAAACGAAGTCCCTGCTCTGTTGACCAAAGCAGTTATACTTCTATTGCATCTAAAAGGCAAAAGGCTGATTTATCTATCAGCACAAAGGAGAGGAAGGAGAAGATTGGGGAAAGAATAGTTGCTCTTCAGCAGCTTGTTTCACCATATGGAAAGACAGATACATCTTCTGTTCTAGAGGACGCAATGGAATACATAGGATTCCTTCATAAACAAGTTAAGCTGCTCAGTGCTCCATACCTTGAAACTTCAGCAGCAGCCAAGATGCAGGGTATGGAGGCATGCAGCCTGAGGAGTGGAGGGTTATGCCTTGTTCCTGTGTCATTTACAATTGGAGTTGCTGAGAGCAATGGTGCAGATATCTGGGCTCCCATCAAAACTGCTACTTCACCAAAATTGGAGAAGGATGTCTCGCAATTTCATTGA 483 0.4265 MIRIVLIREEGIDVRKMMEHKRSPCSVDQSSYTSIASKRQKADLSISTKERKEKIGERIVALQQLVSPYGKTDTSSVLEDAMEYIGFLHKQVKLLSAPYLETSAAAKMQGMEACSLRSGGLCLVPVSFTIGVAESNGADIWAPIKTATSPKLEKDVSQFH* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04605 160 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 39 88 IPR011598 GO:0046983
Phac3g04605 160 CDD bHLH_AtbHLH_like 45 96 IPR045239 -
Phac3g04605 160 Gene3D - 36 110 IPR036638 GO:0046983
Phac3g04605 160 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 33 129 - -
Phac3g04605 160 FunFam Transcription factor bHLH113 family 38 114 - -
Phac3g04605 160 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 41 103 IPR036638 GO:0046983
Phac3g04605 160 SMART finulus 45 94 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04605 Phac-Chr3 43715640 43719265 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04605 17 152 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 55.063 1.99e-53 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04605 - - gmx:100809747 283.493