Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04604 ATGATAGCCAGTTCCTTCTGCAATGCAGATTCTATGTTTTCAAGAGAAGAGGGGATAGATGTTAGAAAGATGATGGAGCATAAACGAAGTCCCTGCTCTGTTGACCAAAGCAGTTATACTTCTATTGCATCTAAAAGGCAAAAGGCTGATTTATCTATCAGCACAAAGGAGAGGAAGGAGAAGATTGGGGAAAGAATAGTTGCTCTTCAGCAGCTTGTTTCACCATATGGAAAGACAGATACATCTTCTGTTCTAGAGGACGCAATGGAATACATAGGATTCCTTCATAAACAACTGCTCAGTGCTCCATACCTTGAAACTTCAGCAGCAGCCAAGATGCAGGGTATGGAGGCATGCAGCCTGAGGAGTGGAGGGTTATGCCTTGTTCCTGTGTCATTTACAATTGGAGTTGCTGAGAGCAATGGTGCAGATATCTGGGCTCCCATCAAAACTGCTACTTCACCAAAATTGGAGAAGGATGTCTCGCAATTTCATTGA 498 0.4317 MIASSFCNADSMFSREEGIDVRKMMEHKRSPCSVDQSSYTSIASKRQKADLSISTKERKEKIGERIVALQQLVSPYGKTDTSSVLEDAMEYIGFLHKQLLSAPYLETSAAAKMQGMEACSLRSGGLCLVPVSFTIGVAESNGADIWAPIKTATSPKLEKDVSQFH* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04604 165 SMART finulus 52 101 IPR011598 GO:0046983
Phac3g04604 165 CDD bHLH_AtbHLH_like 52 99 IPR045239 -
Phac3g04604 165 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Phac3g04604 165 FunFam Transcription factor bHLH113 family 45 119 - -
Phac3g04604 165 Gene3D - 43 102 IPR036638 GO:0046983
Phac3g04604 165 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 101 IPR036638 GO:0046983
Phac3g04604 165 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 36 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04604 Phac-Chr3 43714970 43719265 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04604 24 155 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 54.487 9.02e-52 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04604 - - vun:114178105 303.908