Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04603 ATGATGGAGCATAAACGAAGTCCCTGCTCTGTTGACCAAAGCAGTTATACTTCTATTGCATCTAAAAGGCAAAAGGCTGATTTATCTATCAGCACAAAGGAGAGGAAGGAGAAGATTGGGGAAAGAATAGTTGCTCTTCAGCAGCTTGTTTCACCATATGGAAAGACAGATACATCTTCTGTTCTAGAGGACGCAATGGAATACATAGGATTCCTTCATAAACAAGTTAAGCTGCTCAGTGCTCCATACCTTGAAACTTCAGCAGCAGCCAAGATGCAGGGTATGGAGGCATGCAGCCTGAGGAGTGGAGGGTTATGCCTTGTTCCTGTGTCATTTACAATTGGAGTTGCTGAGAGCAATGGTGCAGATATCTGGGCTCCCATCAAAACTGCTACTTCACCAAAATTGGAGAAGGATGTCTCGCAATTTCATTGA 435 0.4368 MMEHKRSPCSVDQSSYTSIASKRQKADLSISTKERKEKIGERIVALQQLVSPYGKTDTSSVLEDAMEYIGFLHKQVKLLSAPYLETSAAAKMQGMEACSLRSGGLCLVPVSFTIGVAESNGADIWAPIKTATSPKLEKDVSQFH* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04603 144 Gene3D - 20 94 IPR036638 GO:0046983
Phac3g04603 144 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 24 87 IPR036638 GO:0046983
Phac3g04603 144 CDD bHLH_AtbHLH_like 29 80 IPR045239 -
Phac3g04603 144 SMART finulus 29 78 IPR011598 GO:0046983
Phac3g04603 144 FunFam Transcription factor bHLH113 family 22 98 - -
Phac3g04603 144 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 18 113 - -
Phac3g04603 144 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 23 72 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04603 Phac-Chr3 43714970 43719265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04603 1 136 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 55.063 1.11e-53 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04603 - - gmx:100809747 266.159