Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04566 ATGGGTTCGGTTCCGGCAGAACTGAGCTTGGATTTGAGACCCTCCTTTGTCCCCAAAACCATCACCGATTTCCTCCGCCACCTCTCCTCCGCCCCCGACCGCCTCGCCACTCTCCACGATTTCCTGGCGCGCTTGGAAGACGAGCTCCGCAAGATCCACGCCTTCAAGCGCGAGCTTCCTCTCTCCATGCTCCTCTTAAACGACGCAATTTCACTTCTCAAGGCGGAATCGCAGAAATGCCGGCCGCGTGATTCTCCGCCGGCGTTGGAGGAGTTCATTCCCTTGAAGAAAGAGCATGATCGTAACGACGGGAATAACCATAATGATGATAATGACAATGATAATGAATGCAGGGATAAGAGGAATTGGTTGAGTTCTGTTCAGCTTTGGAATAACACTACCACTAATAACAATGCATCCGATCGGAAACAACAACAGCAGCAGCAACAACTTCATAAATTAGAAACCAAGAAAATTGAAGAAGGGCAATCTGTTGGTGAGGATCCTTTTCAGTCGTGTAGCAATAGAAATGGAGGAAGAAGGGCGTTTATGCCTTTCTCTAGGCACTCTTCTTCTTCATCTTCTGTGCCGGTGGCAACAGTGGGTCTGGCTGCTGCAACCAAAGAAGAGAAGGAAGAGAGTGTTATGAATAGGCTTTCTCTTCAGACCCCTTCTTCTGTGAAAGAGGGTTGTGGTTCAAGGGGATCCAGAAGCAGTTCCAACAGGGCTGTTTCTTCTTCTTCTCCTCCTACGGTTCACCCCAGTTTGAGGGCATCATCGCTTCAGCAGACTGCTAGGAAGCAGAGGAGATGCTGGTCCCCTGAGTTGCACAGACGATTTGTTAATGCTTTGCAGAAACTAGGAGGTTCTCAGACAGCAACACCAAAACAAATTAGAGAGCTGATGCAGGTTGATGGCCTGACTAACGATGAAGTGAAAAGCCACTTACAAAAATACCGACTTCATACGCGGAGAGTTCCATCAGCAAGTGGTAATCAGCCAGTTGTGGTTCTTGGAGGTTTGTGGATGTCTCAAGATCAGTACAATGAGTCCTCAAAAGTTAGCAGTTCAGGGTCAGGTTCTCCTCAAAGTCCCCTTCATCTGACTGCAGGATCTGGAGGGGGAACATCCCCAAGCATGGAAGATGATGAAGATGCAAGATCCGAGAGTTATAGTTGGAAAAGTCATATGCACAAACCTGGAAAAGTTGATGTATAG 1218 0.4803 MGSVPAELSLDLRPSFVPKTITDFLRHLSSAPDRLATLHDFLARLEDELRKIHAFKRELPLSMLLLNDAISLLKAESQKCRPRDSPPALEEFIPLKKEHDRNDGNNHNDDNDNDNECRDKRNWLSSVQLWNNTTTNNNASDRKQQQQQQQLHKLETKKIEEGQSVGEDPFQSCSNRNGGRRAFMPFSRHSSSSSSVPVATVGLAAATKEEKEESVMNRLSLQTPSSVKEGCGSRGSRSSSNRAVSSSSPPTVHPSLRASSLQQTARKQRRCWSPELHRRFVNALQKLGGSQTATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPSASGNQPVVVLGGLWMSQDQYNESSKVSSSGSGSPQSPLHLTAGSGGGTSPSMEDDEDARSESYSWKSHMHKPGKVDV* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04566 405 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 264 324 IPR017930 -
Phac3g04566 405 MobiDBLite consensus disorder prediction 186 200 - -
Phac3g04566 405 Coils Coil 137 157 - -
Phac3g04566 405 Gene3D - 266 324 - -
Phac3g04566 405 SUPERFAMILY Homeodomain-like 264 325 IPR009057 -
Phac3g04566 405 MobiDBLite consensus disorder prediction 349 376 - -
Phac3g04566 405 MobiDBLite consensus disorder prediction 349 405 - -
Phac3g04566 405 Pfam Myb-like DNA-binding domain 269 320 IPR001005 -
Phac3g04566 405 MobiDBLite consensus disorder prediction 159 270 - -
Phac3g04566 405 NCBIfam myb-like DNA-binding domain, SHAQKYF class 267 322 IPR006447 GO:0003677
Phac3g04566 405 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 20 395 IPR044787 GO:0003700|GO:0006355
Phac3g04566 405 FunFam Myb family transcription factor 266 324 - -
Phac3g04566 405 MobiDBLite consensus disorder prediction 380 405 - -
Phac3g04566 405 MobiDBLite consensus disorder prediction 95 118 - -
Phac3g04566 405 MobiDBLite consensus disorder prediction 217 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04566 Phac-Chr3 43478046 43481252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04566 6 343 G2-like Transcription Factor Family AT2G03500 38.462 3.29e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac3g04566 Myb_DNA-binding 3.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04566 - - gmx:100806237 613.609