Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04562 ATGTGCAGAGAAGCGAAGAGAAGACAGCATATAACAGAGAAGCATCTAGAGAGAGACAGTTCACGAGTGTGTCACCGCCAATTTGCAACTACTGATACTATCATACTACTACTACTCTATGCATATGCATATGCATGGTTACTCATTTGGGTTGGTGAAGGTTTCACGGGGTGGAACCATTTCTGGTCTCTTTCTTCACCCACCAACTCTAAATCCACTGGCCCACACCCAACCACGTCAAACCCTTTCTGCTTTTGCTTCTTCTTCAAAAACACTTCTTTTTTAAACCAAATGGTGGATCGCTCTGCTATCACTGTTGTGCCAGGAATGGATATGCCCATCATGCATGACAGTGATCGCTATGAACTTGTGCGTGACATTGGTTCTGGCAACTTCGGTGTAGCCAGGCTCATGAGGGACAAGCACACCGAGGAACTTGTTGCTGTTAAGTATATTGAGAGAGGTGAAAAGATAGATGAAAATGTACAGAGGGAAATTATAAATCACAGATCTCTGAGGCATCCCAATATTGTGAGGTTCAAGGAGGTTATATTGACACCAACACATTTGGCAATTGTTATGGAATATGCTTCTGGAGGAGAGCTATTTGAGCGAATATGCAATGCAGGGAGGTTCAGTGAGGATGAGGCACGCTTCTTCTTCCAACAACTTATATCAGGGGTTAGCTATTGTCATGCAATGCAAGTATGCCATCGCGACTTGAAGTTGGAGAACACATTGTTGGATGGTAGTCCCGCTCCTCGTTTGAAGATTTGTGATTTTGGCTATTCAAAGTCCTCAGTGCTACATTCTCAACCAAAATCTACAGTGGGAACCCCTGCATATATCGCTCCAGAAGTTTTGCTTAAGAAGGAATATGATGGCAAGATTGCAGATGTGTGGTCTTGTGGGGTGACCTTATATGTCATGTTGGTGGGTGCATATCCATTTGAGGATCCAGAGGAACCTAAAAATTTCCGCAAGACAATACATAGGATTTTGAATGTTCAGTACTCAATTCCAGACTATGTTCACATATCTCCCGAGTGCCGTCATCTGATATCAAGGATTTTTGTTGCTGATCCTGCAAAAAGAATAAGTATTCCTGAGATCAGAAACCACGAGTGGTTTTTGAAGAACCTTCCAAGTGATCTGATGGATGGGAATACGAAGAATGAGTTTGAGGAGGGTGATGAACCAACACAAAGCATTGAAGAAATCATGCAGATAATCAGAGAAGCTACAATTCCTGCAGCTGGATCTCAGTCTCCCAACCATGATCTTACTGGTAGCTTGGATATTGATGAGGACATGGATACAGATCCTGACCTTGACTTAGATAGCAGTGGAGAAATAGTGTATGCTATGTAA 1371 0.4274 MCREAKRRQHITEKHLERDSSRVCHRQFATTDTIILLLLYAYAYAWLLIWVGEGFTGWNHFWSLSSPTNSKSTGPHPTTSNPFCFCFFFKNTSFLNQMVDRSAITVVPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKHTEELVAVKYIERGEKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYSIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPSDLMDGNTKNEFEEGDEPTQSIEEIMQIIREATIPAAGSQSPNHDLTGSLDIDEDMDTDPDLDLDSSGEIVYAM* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04562 456 FunFam Serine/threonine-protein kinase SRK2E 112 196 - -
Phac3g04562 456 Pfam Protein kinase domain 121 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04562 456 SUPERFAMILY Protein kinase-like (PK-like) 112 385 IPR011009 -
Phac3g04562 456 CDD STKc_SnRK2-3 120 376 - -
Phac3g04562 456 FunFam Serine/threonine-protein kinase SRK2E 197 385 - -
Phac3g04562 456 MobiDBLite consensus disorder prediction 416 449 - -
Phac3g04562 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Phac3g04562 456 Gene3D Phosphorylase Kinase; domain 1 99 196 - -
Phac3g04562 456 ProSiteProfiles Protein kinase domain profile. 121 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04562 456 SMART serkin_6 121 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g04562 456 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Phac3g04562 456 Gene3D Transferase(Phosphotransferase) domain 1 197 385 - -
Phac3g04562 456 PANTHER SERINE/THREONINE KINASE 120 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04562 Phac-Chr3 43455922 43460346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04562 120 383 CBL-interacting serine-threonine protein kinases AT5G25110 45.455 5.98e-69 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Phac3g04562 Pkinase 6.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04562 K14498 - gmx:100796253 669.077