Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04540 ATGAACTTCAGGAACTACGATGATAATAACTCTACTTGGGATGCCATCCATGGGAAGACACCGGCAAATGTTGGTTCTCTGCTGAGGCAGTCATCAGTATACTCCCTTACATTTGATGAGTTTCAGAGCACCATGGGTGGGATTGGGAAGGAATTTGGGTCCATGAACATGGATGAACTATTGAAGAACATTTGGACAGCTGAAGAGACTCAGGCCTTGGCATTTTCAGCTGGTACAGGAGAAGGCCACAACCATAACCCAGTTAGTGGTGGTTTGCAAAGACAGGGTTCTTTGACATTGCCAAGGACTCTTAGTCAGAAAACAGTGGATGAGGTTTGGAGGGACGTCATCAAAGATAGTGGTGGGGCCAACGATGGGAGTGGCAATGGTGGTTCATCCATTCCTCAAAGGCAACCAACACTGGGAGAAATGACTTTAGAGGAGTTTTTGGTGAGGGCTGGGGTGGTGAGAGAAGATGTGCCTCAACAACAAATTGGAAAACCAAATAACAATGGATGGTTTGGTGACTTTCCTAGACCAAACAATAACAATGGCCTACTTCTTGGATTTCAACAACCAAACAAAAGTAATAGGAATTTGGGTGAGAGGGTGGTGGAGAACAACAACAACTCAGCTCCCAAACAACCTCCTTTATCACTAAACTCAAACCACTCTCAGCGACCAACACAACAGCAACCACCACTTTTTCCAAAGCCATCAAATGTAGCTTTTGCTGCTCCTATGCATTTGTTGAACACTGCTCCACATGCTAGCCCTGCCAGAAGAGGAGGGTTGATGGAGCATTCACTGAATGTTGGAATGGTTGGTTTAGCCTCAGCTAATCCAGAGGCTTCTCCCTCCAGGAAAATATCATCAGATGTAATTTCAAGAAGTAATGTAGACAACTCTTCACTGTCACCAGTTCATTATGCAATCAACAGGGGAAGGAAATGCAGTGCTATAGAGAAAGTGGTTGAGAGAAGACAAAGGAGAATGATCAAAAATAGAGAATCAGCTGCCAGGTCAAGGGCTCGTAAGCAGGCCTACACTTTCGAACTAGAAGCTGAAGTTGCAAAACTCAAGGAAATAAACAGAGAATTGCAAAGAAAACAGGCAGAAATTAAGGAAATGCAGAAAAATAAGCAGGATTTGGACCCTGCATGCCAGCCAAGGGTAAGTAGTAGAATACAATGCTTGAGAAGGACACTTACAGGACCATGGTAG 1224 0.4428 MNFRNYDDNNSTWDAIHGKTPANVGSLLRQSSVYSLTFDEFQSTMGGIGKEFGSMNMDELLKNIWTAEETQALAFSAGTGEGHNHNPVSGGLQRQGSLTLPRTLSQKTVDEVWRDVIKDSGGANDGSGNGGSSIPQRQPTLGEMTLEEFLVRAGVVREDVPQQQIGKPNNNGWFGDFPRPNNNNGLLLGFQQPNKSNRNLGERVVENNNNSAPKQPPLSLNSNHSQRPTQQQPPLFPKPSNVAFAAPMHLLNTAPHASPARRGGLMEHSLNVGMVGLASANPEASPSRKISSDVISRSNVDNSSLSPVHYAINRGRKCSAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVAKLKEINRELQRKQAEIKEMQKNKQDLDPACQPRVSSRIQCLRRTLTGPW* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04540 407 SMART brlzneu 323 382 IPR004827 GO:0003700|GO:0006355
Phac3g04540 407 Pfam bZIP transcription factor 327 381 IPR004827 GO:0003700|GO:0006355
Phac3g04540 407 Gene3D - 325 383 - -
Phac3g04540 407 Coils Coil 350 380 - -
Phac3g04540 407 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 325 376 IPR004827 GO:0003700|GO:0006355
Phac3g04540 407 MobiDBLite consensus disorder prediction 161 241 - -
Phac3g04540 407 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 407 IPR043452 GO:0003700|GO:0045893
Phac3g04540 407 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 330 345 IPR004827 GO:0003700|GO:0006355
Phac3g04540 407 CDD bZIP_plant_BZIP46 327 381 - -
Phac3g04540 407 MobiDBLite consensus disorder prediction 163 231 - -
Phac3g04540 407 MobiDBLite consensus disorder prediction 125 140 - -
Phac3g04540 407 MobiDBLite consensus disorder prediction 118 141 - -
Phac3g04540 407 SUPERFAMILY Leucine zipper domain 327 376 IPR046347 GO:0003700|GO:0006355
Phac3g04540 407 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 325 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04540 Phac-Chr3 43294739 43299303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04540 27 407 bZIP Transcription Factor Family AT1G49720 47.382 1.71e-98 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac3g04540 bZIP_1 2.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04540 K14432 - gmx:100776600 612.453