Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04520 ATGGCGGGGGTTTCTCTCAAGTGCGGTGACTGCGGTGCTCTGTTGAGAACCGTAGAAGAAGCCCAAGACCACGCCGAACTCACTTCCCATTCCAACTTCTCCGAATCCACCGAACCGGTTCTCAACCTCGTTTGCACCGCTTGCTCCAAACCCTGCCGATCCAAAACCGAGAGTGATTTGCACACTAAAAGAACCGGTCACACCGAGTTTGTTGACAAGACTTCCGAGACCGTGAAACCGATTAGTTTGGAGGCACCGAAGGTGGATGCAGCTGCTTCGTCGGAAAACCCTTCCGGCGCCGCATCAACTGATCAAAATGAAGAAATGGTTGTTCCCGAAGTTGACAAAAAGCTGCTTGAGGAACTCGAATCAATGGGTTTTTCTACGACACGGGCTACACGGGCGCTTCATTACTCTGGTAATGCTGGCCTCGAGGCTGCTGTAAACTGGATAGTAGAGCATGAGAATGATTCTGACATAGATCAGATGCCCTTGGTACCTGCCAACGCCAAAATTGAGGCTCCTAAACCTTCTCTTACTCCTGAAGAACTGAAGGCCAAACAACATGAACTAAGGTTGTTGGCCTTGAGAAAAGCAGAGAAAGAGGAAGAGAAAAGGGCTAGGGAGAAAATCAAGCAAAAGTTGGAAGAAGACAAGGCAGAAAGAAGGCGGAGACTTGGATTGCCTCCAGAGGAACCTTCAGCAGCCAAACCTTCACCAGCACCTGTTGTGGAGGATAAAAAGAGTTTTGTGCCTGTTAGGCCTGCCACAAAAGCTGAGCAAATGAGAGAGTGCCTCCGTTCTCTCAAGCAGAACCACAAGTTGATGAACTGGTGTCAATCTAATGTTGAATAG 855 0.4901 MAGVSLKCGDCGALLRTVEEAQDHAELTSHSNFSESTEPVLNLVCTACSKPCRSKTESDLHTKRTGHTEFVDKTSETVKPISLEAPKVDAAASSENPSGAASTDQNEEMVVPEVDKKLLEELESMGFSTTRATRALHYSGNAGLEAAVNWIVEHENDSDIDQMPLVPANAKIEAPKPSLTPEELKAKQHELRLLALRKAEKEEEKRAREKIKQKLEEDKAERRRRLGLPPEEPSAAKPSPAPVVEDKKSFVPVRPATKAEQMRECLRSLKQNHKLMNWCQSNVE* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04520 284 CDD UBA_PUB_plant 113 161 - -
Phac3g04520 284 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 113 154 IPR015940 -
Phac3g04520 284 MobiDBLite consensus disorder prediction 200 230 - -
Phac3g04520 284 SUPERFAMILY UBA-like 101 167 IPR009060 GO:0005515
Phac3g04520 284 SMART uba_6 115 153 IPR015940 -
Phac3g04520 284 Coils Coil 184 221 - -
Phac3g04520 284 ProSitePatterns Zinc finger C2H2 type domain signature. 8 30 IPR013087 -
Phac3g04520 284 PANTHER F13M7.16 PROTEIN 1 194 - -
Phac3g04520 284 MobiDBLite consensus disorder prediction 85 108 - -
Phac3g04520 284 Gene3D - 115 161 - -
Phac3g04520 284 Pfam UBA/TS-N domain 119 151 IPR015940 -
Phac3g04520 284 MobiDBLite consensus disorder prediction 200 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04520 Phac-Chr3 43189527 43195581 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04520 95 274 C2H2 Transcription Factor Family AT1G04850 58.222 8.51e-66 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04520 K24348 - gmx:100794687 441.039