Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04512 ATGCCTGCCCTCATCGATCTCAACAGCGCCACCGAGGACCATGAAACGCCATCGTCTCGCCCATCCTCCGTCTGCCTCGAACTCTGGCACGCCTGCGCGGGTCCTATGATCTCCTTGCCCAAGAAAGGGACCCTTGTCGTGTACTTCCCTCAAGGACACTTGGAACAACACCTTCACGATTTTCCGCTCCCTGCTTCTGCTAACATCCCCTCCCATCTCTTCTGTCGCGTTCTCGATGTCAAGCTCCATTCTGAGGAAGGGAGCGATGAGGTATATTGCCAGGTGGTGCTGGTTCCCGAAAGTGAGCAAGGGCATCAGAAGTTGCGGGAAGGGGAAATTGATGCTGATGGTGAAGAGGAGGATGCTGAAGCTGTGATGAAGTCCACCACACCCCACATGTTCTGCAAGACTTTGACAGCTTCTGATACTAGCACTCATGGTGGATTCTCTGTGCCTCGTCGTGCTGCGGAAGATTGCTTTCCACCTCTGGATTACAGTCAACAGAGACCTTCACAGGAGCTTGTGGCGAAGGATCTGCATGGCCAAGAATGGAGGTTCCGACATATTTATAGGGGGCAACCACGACGACACTTGCTTACCACTGGGTGGAGTGCATTTGTGAACAAGAAGAAACTTGTATCTAGAGATGCTGTTCTGTTTCTTAGGGGTGAGGATGGAGAACTGAGATTGGGAATTCGTAGGGCTGCTCAATTGAAAAGTGGCAGTACCATTTCAACTTTTGCTGGCCAGCAATTGAATCTTAGCAGTCTTCTGGATGTGGTTAATGCTTTATCAGCAAGATGTGCCTTTAGTGTTCACTATAATCCAAGGGTCAGTTCATCTGAGTTCATCATACCCATTAAGAAATTCTTGAGGAGCCTTGATTATTCTTATTCAGTTGGAACAAGATTTAGGATGCGTTTTGAAACTGAAGATGCCGCAGAGCGAAGATTTACAGGATTGGTTGTTGGAATTACTGATGTGGATCCTGTTAGATGGCCTGGATCAAAATGGAGATGCCTAATGGTGAGGTGGGATGACCTGGAAGCCACAAGGCATAATAGGGTTTCACCCTGGGAGATTGAGCCATCTGGTTCTGCATCTACTGCAAATAACATGATATCAGCTGGTTTGAAGAGGACCAAGATTGGATTGCCTTCAACCAAGCTAGATTTTCAAGTTTCCAATGCAATTGGAGCATCAGACTTTGGCGAATCACTAAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATGTTGGGTGTTAACACTACTTTTGATAGTACTAATGGTCAGGGTCACCAGCTATCAGATTTGAGGAGATGCTATCCTGGCTCAAACTGTTCTAGGATTGCTGCAACCGGAAATAGCATTGGAATTCCGCAAGTGAGTTCCAATATTTCCTGCAATGGCATAGGCTTCAGTGAATCTTTCAGATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATATGGAAGGGCCCTGTCTGTTGATGAGGCTTGTGGAAATGGTCGCTTTGGACCTTTTGATGGTTACCATACACTGAGATCCAGAAATGGATGGTCTTCCCACTTGAGTAACAGTTCTTCACATTTGCATCCACCTGTTCCATCTGGGCAAGTTTCATCTCCGTCATCTGTGTTAATGTTCCAGCAAGCACACAATCCAGCTTCAAACTCTGATTATAACAGCAAAATTAGTCAGGTGATGGAAGGTAAAGTCCAACAACGATCATACAATTCTGAAGCTAAAGGTGGAAAATTTGTATCAACCCCTTATGAGCCTCTTCATGGACTAGCTCAGGAAGGCACAAATTCTTTTGGGGTCTCAAACTTGCATAATCAGTTAGAAACTTCACGTTCACACGATTCTATTTCAGCACTTCGGGCTACTCAAGAGTTGGTTCCCACTTGTAATAGTCGATGCAGAGTCTTTGGCTTCTCATTAACTGAGGGTGCTCCCGTTGCAAGTAAAGAAGTAGCCGGCGCCGACCCGTCTGCAGTTACATGTTCTGGACCTTCCTTTGCAAGACATGCTGAAGATGATTTCCATCCAGTGCATTCGCTTAGGAGCAAGGCAGTGGGAAGTTATTGCACCAAAGGAGTGCTGCAATATTGA 2127 0.4645 MPALIDLNSATEDHETPSSRPSSVCLELWHACAGPMISLPKKGTLVVYFPQGHLEQHLHDFPLPASANIPSHLFCRVLDVKLHSEEGSDEVYCQVVLVPESEQGHQKLREGEIDADGEEEDAEAVMKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSRDAVLFLRGEDGELRLGIRRAAQLKSGSTISTFAGQQLNLSSLLDVVNALSARCAFSVHYNPRVSSSEFIIPIKKFLRSLDYSYSVGTRFRMRFETEDAAERRFTGLVVGITDVDPVRWPGSKWRCLMVRWDDLEATRHNRVSPWEIEPSGSASTANNMISAGLKRTKIGLPSTKLDFQVSNAIGASDFGESLRFQKVLQGQEMLGVNTTFDSTNGQGHQLSDLRRCYPGSNCSRIAATGNSIGIPQVSSNISCNGIGFSESFRFQKVLQGQEILPSQPYGRALSVDEACGNGRFGPFDGYHTLRSRNGWSSHLSNSSSHLHPPVPSGQVSSPSSVLMFQQAHNPASNSDYNSKISQVMEGKVQQRSYNSEAKGGKFVSTPYEPLHGLAQEGTNSFGVSNLHNQLETSRSHDSISALRATQELVPTCNSRCRVFGFSLTEGAPVASKEVAGADPSAVTCSGPSFARHAEDDFHPVHSLRSKAVGSYCTKGVLQY* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04512 708 ProSiteProfiles B3 DNA-binding domain profile. 134 236 IPR003340 GO:0003677
Phac3g04512 708 Gene3D - 297 371 - -
Phac3g04512 708 SMART B3_2 134 236 IPR003340 GO:0003677
Phac3g04512 708 FunFam Auxin response factor 297 368 - -
Phac3g04512 708 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 23 654 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac3g04512 708 Gene3D - 132 236 IPR015300 -
Phac3g04512 708 Pfam Auxin response factor 261 341 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac3g04512 708 SUPERFAMILY DNA-binding pseudobarrel domain 127 244 IPR015300 -
Phac3g04512 708 CDD B3_DNA 132 234 IPR003340 GO:0003677
Phac3g04512 708 Pfam B3 DNA binding domain 134 235 IPR003340 GO:0003677
Phac3g04512 708 MobiDBLite consensus disorder prediction 526 548 - -
Phac3g04512 708 FunFam Auxin response factor 132 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04512 Phac-Chr3 43135161 43141162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04512 22 488 B3 DNA Binding Superfamily AT5G60450 50.837 2.93e-143 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac3g04512 B3 4.6e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04512 K14486 - gmx:100808119 1198.34